Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g1267 ATGAATTCTGCTTTAGATCTACAGTCGAATGATACTACTGGCGAAGATCTAGAACAAGAGATGCCTGATTCCAAAACAAACGTGCAAGCCATTGTTGTACTTCCATTGGCATATAAACGGCCAAATGATGATTCTATCTTCGCATCCACTTCTTCTGGGAAAAGGGTTGCTCCGAAGGTTACCTACACAACCTTTTCTAGTGTTAATCTTACTCCTCACCAGAATATTGAGGCGGTAAATAGGAGGAGAACAGCTGAAACACCTGAAGGATGGATTTGTGAGCCAAGAGCCCGAAAAAATGGAGTAATTGATAAGTTTTACTATCATAAACATACGAACGTAAGATGCCGTTCGCTGAAAGAAATACAAAGGTATTCGTTACATGGAATTCGTCCTGGACCTAGAGCCAAAGAATTGGAAAAGGAAATCCTTGCTGCTGAAATGAGAGCCAAGGCGAGAGAGAAAGAAATCCGCCCGAGTACTGAAGCTCGTGTAGAAGGCGTGGTTGCAAAGAATAAGGGAAAATCAAAGGTTCATACAGAGCTGGTGAACAAGAATGAACATCATCAAAGTTTTGTCCAAAAATTGCTTGCCGAAGCATGGCATAACATGACGCAACCAACTGATATACAGACGGGGGCATGGGCAGAAATGGAAATGAAGCAGCAGGAAGAAGAGGGGAAATCAATGGAGATGAAGCTTCAAGAGGAACGTGAAAAGATGATTCGGAAATTTGAAGAGGAGCGTAAAGAGCTGGAAAGGAATTTTGAAGAAGAGAGAGCGCAGCTTCACCAGTGGATGAAAGATGAGATTGACTACAGAATCCAACTCCAGCTGGATGCCATCATACCCACCCTCCTCAAGATTCGATCGAATCGATCATGTATAACTGCTGTACTGACGTTGAGATTCTGCGCGAGCCGAGCTGTGCAGTCACAGAAAACTCATTCCCGTCATCACAGCCAGAAATTGGAGGTGTACAATGAGGTGCTCCGCCGAATTGGAGAGTTCAACTATGAGGAGGACAATATTCCAGATTTTGATGATCAACTATGGCTTCATTTTAATCGTCTTCCTGCTAGGTACGCATTTGATGTGAATGTGGAGAGGGCAGAAGATGTTCTTGCTCATATGAGACTACTGAAGCTGGCAGAGGACCCTGCTAATCGACCTGCAGTTCAAGTTCGCTTAGTACAGCTCACCAGAAAACATATCACTTGCTCTTTCAAATTCCACTGGTTATTGCATTATAAAACTCTTGAAGCTGTACGGTTCTATGAGTTTGGAGTTGAGGTACAACCCTTTGGTAGTGCAAATTGTGGTGACTCTATGCAATCAGATCCCTCTGAGAATGAAGATGCACAGAGCTCCTTAAACTATTCTTTTATCAGGGAAGTAAACACAATATTGAAGATGGGACAGTGCTCCGGCTATGATACCATATTCTTTCCATTAACTGCATTACTCGGGGAGATGGGATTAAACATTCAAGAAGCTCATGCATTTTCCACCAACGATGGCTTTTCTCTTGATGTATTTGTTCTTGATGGTTGGCCTAATGAGGATACTAAGGAGCTCAAAGTGGTATTGGAAAAGGAAATTTTGAAATTTAAGGAGCAATATCTGTCAGAACAGGGCACACATTATGCTGCCGATGATGATCATCAGGAAAGGATGGAACCCTTTCCTCCTTGCATAGAAATGCCGTCTGATGGAACTGATGTCTGGGAAATTAATACCAACCTCTTGAAATTTGAAAACAAAGTGGGCTCTGGATCATTCGGTGATTTGTACAAAGCCACATATTGCAGCCAAATTGTGGCTATCAAAGTCCTCAAACCTGAGCGCACAAATACAGATATGTTGAGAGAGTTTGCACGGGAAGTTTATATCATGAGGTTTGTTAACATACCTGAATGAAGATTCGACACAGGAATGTTGTGCAATTCATGGGAGCATGTACTCGACCGCCAAATCCGTGTATTGTTATTGGTGGTGAAGGTTGCTGATTTTGGGGTTGCCAGAGTCAAGATACAATCTGGAGTGATGACAGCTGAGACTGGAACTTACCGTTGGATGGCTCCAGAGGTCATTGAACACAAACCTTATGACCAGAAAGCAGATGTCTTAACTGCCTTACTCTTTCTTGACTCCATTACAAGCAGCAGTAGGCGTGGTGCAAAAGGTTTTCATTCTGTTCTTTTCATTTTTCATAGATCATTTTGA 2226 0.4254 MNSALDLQSNDTTGEDLEQEMPDSKTNVQAIVVLPLAYKRPNDDSIFASTSSGKRVAPKVTYTTFSSVNLTPHQNIEAVNRRRTAETPEGWICEPRARKNGVIDKFYYHKHTNVRCRSLKEIQRYSLHGIRPGPRAKELEKEILAAEMRAKAREKEIRPSTEARVEGVVAKNKGKSKVHTELVNKNEHHQSFVQKLLAEAWHNMTQPTDIQTGAWAEMEMKQQEEEGKSMEMKLQEEREKMIRKFEEERKELERNFEEERAQLHQWMKDEIDYRIQLQLDAIIPTLLKIRSNRSCITAVLTLRFCASRAVQSQKTHSRHHSQKLEVYNEVLRRIGEFNYEEDNIPDFDDQLWLHFNRLPARYAFDVNVERAEDVLAHMRLLKLAEDPANRPAVQVRLVQLTRKHITCSFKFHWLLHYKTLEAVRFYEFGVEVQPFGSANCGDSMQSDPSENEDAQSSLNYSFIREVNTILKMGQCSGYDTIFFPLTALLGEMGLNIQEAHAFSTNDGFSLDVFVLDGWPNEDTKELKVVLEKEILKFKEQYLSEQGTHYAADDDHQERMEPFPPCIEMPSDGTDVWEINTNLLKFENKVGSGSFGDLYKATYCSQIVAIKVLKPERTNTDMLREFAREVYIMRFVNIPEXRFDTGMLCNSWEHVLDRQIRVLLLVVKVADFGVARVKIQSGVMTAETGTYRWMAPEVIEHKPYDQKADVLTALLFLDSITSSSRRGAKGFHSVLFIFHRSF 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g1267 741 Pfam Protein kinase domain 665 710 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele53g1267 741 Gene3D - 79 133 - -
Lele53g1267 741 Coils Coil 520 540 - -
Lele53g1267 741 Gene3D Transferase(Phosphotransferase) domain 1 654 710 - -
Lele53g1267 741 SUPERFAMILY DNA-binding domain 86 125 IPR016177 GO:0003677
Lele53g1267 741 MobiDBLite consensus disorder prediction 1 15 - -
Lele53g1267 741 Gene3D Phosphorylase Kinase; domain 1 574 640 - -
Lele53g1267 741 SUPERFAMILY Protein kinase-like (PK-like) 564 709 IPR011009 -
Lele53g1267 741 MobiDBLite consensus disorder prediction 1 24 - -
Lele53g1267 741 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 661 709 - -
Lele53g1267 741 Coils Coil 220 269 - -
Lele53g1267 741 ProSiteProfiles Protein kinase domain profile. 583 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele53g1267 741 Coils Coil 136 156 - -
Lele53g1267 741 ProSitePatterns Protein kinases ATP-binding region signature. 589 610 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g1267 Lele-ChrLele53 21203558 21216587 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g1267 305 716 MAP Kinase Kinase Kinase AT4G35780 45.509 2.14e-120 371
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lele53g1267 Pkinase 5.4e-09 CL0016