Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g1265 ATGACCACGACGTCGTATAGTATCTCCGGCTTCCTTCCCTCCCCTTCTCTCTGCTCCCCCAAACTGGATCATCACCCCAGAATTTCATTTCTGAAACCGCTGAACTCTCGTCAGGCACGGAGCGTTAGTGTTGTTAAATCCAACTTTCCAAACTACTGCACGAAAGCTACTCTGAACGGAAATTTGGAGACCGTCGGAGGTCCGACGTCGGTGCCGGTGCGCGTAGCACACGAGCTGCTTCTTGCTGGACATCGCTTTTTGGATGTGAGAACTCCCGAAGAATTCATCGCAGGACACGCTCCAGGCGCAATTAACATACCATACATGCACAGAGTTGGATCAGGTATGACAAAGAATGCCAATTTTGTTGCAGAAGTCTCATCACGTTTTAGAAAAGATGATGAGATTATTGTTGGCTGTCAACTTGGTAAAAGGTCTATGATGGCTGCTACCGACTTATTAGCTGCTGGATTTTCTGGAATTACAGACATAGCTGGCGGATTCGCTGCTTGGACTCAAAATGGGCTTCCAACAGAACAGTGA 543 0.4788 MTTTSYSISGFLPSPSLCSPKLDHHPRISFLKPLNSRQARSVSVVKSNFPNYCTKATLNGNLETVGGPTSVPVRVAHELLLAGHRFLDVRTPEEFIAGHAPGAINIPYMHRVGSGMTKNANFVAEVSSRFRKDDEIIVGCQLGKRSMMAATDLLAAGFSGITDIAGGFAAWTQNGLPTEQ 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g1265 180 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 15, CHLOROPLASTIC 20 179 - -
Lele53g1265 180 Pfam Rhodanese-like domain 85 173 IPR001763 -
Lele53g1265 180 CDD RHOD 76 171 - -
Lele53g1265 180 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 66 179 IPR036873 -
Lele53g1265 180 Gene3D - 59 179 IPR036873 -
Lele53g1265 180 ProSiteProfiles Rhodanese domain profile. 80 180 IPR001763 -
Lele53g1265 180 SMART rhod_4 70 177 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g1265 Lele-ChrLele53 21193879 21195678 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g1265 70 177 Sulfurtransferasese or Rhodanese AT5G66170 45.455 3.16e-30 105