Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g1251 ATGGTGATTTCTCATGAGAACAATGCAAACTCCGTGAAACCCACGAGTTTGCAAGGAGGCTTGGTTGGCGAGAAACGTAGGGCACTGGGCGTCATTAATCAGAACCTCGTCCCCGGCGTTGTTAACAAGAAGATCGCCAATCCAGAGCACCGACCAATTACGAGGAGATTTGCCGCACAAATTGCTCCCACAAAGCAGCCACTCGCCGAGGAAAGTAAAAAGTTGGATGCTTCAAGTTTAAACTCAAATGGATTTGGAGAATGCATATTTGTGGATGAAGAACACAAGTCAGTGAAGGAACACCCAGTACCCATGTCTTTAGAACAATCAGAAGAAGCAATGCAAACTGAAACTGAAACAGATCAGATGAAGGAAGTTGAGATGGAGGATTTATTTGAAGATCCTATCATGGACATTGATAGCAGTGATGTGAACAACCATCTTGCAGTTGTGGACTATGTTCAAGAACTTTATTCTTACTACAGAAAAATGGAGAGTAGTAGCTGTGTCTCACCAAATTATATGTCACAACAATCTGACATTAATGAAAGGATGAGAGCTATATTGATTGACTGGCTCATTGAGGTGCAAGACAAGTTTGATCTCATGCGTGAGACTTTGTTCCTTACAGTGAACCTAATTGATAGGTTTTTGGAGAAGCAGTCACTGGTAAGGAAGAGGCTTCAATTGGTGGGTTTAGTGGCCATGCTTTTGGCATGCAAGTACGAGGAAGTTTCAGTTCCTGTAGTGGAGGATCTGATACTTATATCAGACAAAGCATATACGAGGAAAGAAGTTCTTGAAATGGAGAAGTTGATGCTTAGCACATTGCAGTTTAACATGACAGTGCCCACACCATATGTGTTTATGAGAAGGTTTCTAAAGGCTGCTCAAGCAGATAAAAAAGTGGAGTTGCTGGCTTTCTTCTTGATAGAGCTATCTCTTGTGGAGTATGGGATGTTGAAGTTCCCACCATCTTTGCTGGCTGCATCTGCAGTTTTTACAGCTCAATGCACCATCTTCGGTTTCAAGCAATGGAGCAAGACATGTGAATGGCACACAAACTACTCAGAAGATCAACTCCTGGAATGCTCTAAATTGATGGTTGATTTGCACCAGAAGGCTGAAAAGGGAAAACTAACTGCTGTACATAGGAAGTATTGCACATCTAAACTCAACTATACTTCAAAATTTGAACCAGCAAGTTTCATTGTGGCGAACCAATTATAG 1230 0.4179 MVISHENNANSVKPTSLQGGLVGEKRRALGVINQNLVPGVVNKKIANPEHRPITRRFAAQIAPTKQPLAEESKKLDASSLNSNGFGECIFVDEEHKSVKEHPVPMSLEQSEEAMQTETETDQMKEVEMEDLFEDPIMDIDSSDVNNHLAVVDYVQELYSYYRKMESSSCVSPNYMSQQSDINERMRAILIDWLIEVQDKFDLMRETLFLTVNLIDRFLEKQSLVRKRLQLVGLVAMLLACKYEEVSVPVVEDLILISDKAYTRKEVLEMEKLMLSTLQFNMTVPTPYVFMRRFLKAAQADKKVELLAFFLIELSLVEYGMLKFPPSLLAASAVFTAQCTIFGFKQWSKTCEWHTNYSEDQLLECSKLMVDLHQKAEKGKLTAVHRKYCTSKLNYTSKFEPASFIVANQL 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g1251 409 FunFam G2/mitotic-specific cyclin-1 261 396 - -
Lele53g1251 409 SUPERFAMILY Cyclin-like 145 281 IPR036915 -
Lele53g1251 409 SMART Cyclin_C_2 284 401 IPR004367 -
Lele53g1251 409 SUPERFAMILY Cyclin-like 283 401 IPR036915 -
Lele53g1251 409 Pfam Cyclin, C-terminal domain 284 399 IPR004367 -
Lele53g1251 409 ProSitePatterns Cyclins signature. 186 217 IPR006671 -
Lele53g1251 409 CDD CYCLIN 185 274 IPR013763 -
Lele53g1251 409 Pfam Cyclin, N-terminal domain 157 281 IPR006671 -
Lele53g1251 409 Gene3D - 170 282 - -
Lele53g1251 409 SMART cyclin_7 288 370 IPR013763 -
Lele53g1251 409 SMART cyclin_7 191 275 IPR013763 -
Lele53g1251 409 PIRSF Cyclin_A_B_D_E 3 409 IPR039361 -
Lele53g1251 409 PANTHER CYCLINS 117 380 IPR039361 -
Lele53g1251 409 CDD CYCLIN 282 369 IPR013763 -
Lele53g1251 409 Gene3D - 157 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g1251 Lele-ChrLele53 21112606 21115506 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g1251 1 405 Core Cell Cycle Gene Families AT1G20610 54.398 1.35e-158 452