Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g1245 ATGGAACCAACCAAGAGTAGAAGATATTCAACCCCAACAAACTCAGCACCACGCATTGCATCAAAAGTCATCTCAGCAACACTGTCTCAGCACATCACACTCCGTTTCAGACTCAATCTTCAAGCAGTGAGCGCTAGAATTTCATTAGTGATGGAGAAGGCAGATTCTGGACAGAAGCTATACACGCTAATGCGACTTTGGGAGTTCCCAGATCAGTATGTCATTGAGCCCACGGATGGCTCTTCTGGTTCTTCTTTGACAGTGAGTCGAGTGGATGGCTCGATGAAGCTTATTGATGCGATTCCAGAATGCAACAAGCTTCGAGTACCTAAGATTTGGACAGTTTTCGGTGTGGTTGGGATGATAAGGCTTTTGGCTGGATCTTATTTGCTGGTTATAACTGATCGTGAATGTGTTGGATCTTACTTTGGTCATCCAATTTACAAAGTTTCATCTATGAAGGTTTTTCCATGCGATCATTCTCTTAATAATACCAATGCTGAACAGAAAAAGACAGAGTTGGAGTTTTCCAAGCTTCTAAACATTGCAGAGAAAACGTCTGGTCTGTTCTTCTCATATGACACCAACTTAACACTGGGTGCCCAGCGATTGAATGACCTTGGTGATGAATCTAGATTGCTTCCTCTTTGGAGACAGTCTGAGCCCCGATTTCTATGGAACAATTATTTGTTGGAAGTGCTCATTGATAATAAGCTCGATCCATTCTTACTCCCTGTGGTACAAGGAAGTTTTCATTACTTTCAAGCAGCCATAGGAAAGGATATTATTGATGTCACTTTGATTGCCAGGAGATGCACGAGAAGAAATGGAACTCGGATGTGGAGAAGAGGAGCTGACCCTGATGGTTATGTTGCTAATTTTGTGGAAACTGAGCAAATTATGCAGTTCAATGGGTATACAGCATCATTTGTTCAGATCCGTGGCTCAATCCCATTGGTTTGGGATCAAATTGTTGACCTGACGTATAAACCTAAGTATGAGTTATTGAGACTTGAGGAAGCTCCTCGAGTCATGGAACGGCATTTCCTAGATTTAAGGAAAAAATATGGGACTGTCTTAGCTGTTGATCTTGTCAACAAGCATGGAGGAGAGGGTCGGCTGAATGAAAAATTTGGAAGCACAATACAGCATTTGGCTAGTGATGATGTAAGATATCTTCACTTTGATTTTCACCATATCTGCGGGCATGTTCATTTCGAACGCCTTTCTATCCTTTATGACCAAATTTCAGATTTTCTCGAAAGAAATGGATATCTTCTATTAAATGAAAAGGGAGAGAAAATGAAGGAGCAGCTTGGAGTTGTCCGAACTAATTGTATTGATTGTCTGGATCGTACAAATGTAACTCAGAGCATGATTGGCCGAAATATGTTGGAATTCCAGCTTAGAAGGCTTGGGGTATTTGAGGCTGAAGAAACCATTACCTCACATCCAAATCTAGATGAAAACTTCAAGATCATGTGGGCTAATCATGGGGATGATATAAGCACCCAATATTCAGGCACGCCTGCTCTAAAAGGAGACTTTGTCAGATATGGGCGCCGTACAATGCAAGGAATACTAAAAGATGGATGTAGTGCTCTTATGCGCTATTATTTAAATAATTTTTGTGACGGAACAAAGCAGGATGCAATTGATCTCCTGCAAGGACATTACATAGTTTCTGTCAGCAGAGATATGACTGCCTCTTTTCAGAAAGGAGGAATCGAAGCTATAGCTTCCTTTCCTCTGGCTTTTTCTCTGGTTATGATTGGATTCGTCTTTGCAACCATGTCATTGAGGGAAGTTCGATACGATTTCCGGCATTTCTTTTTCTCTCTGATGTGGGCAAGCATTAGTATAGGAATAGCTGCATTTGTGAGGGCAAATGGTCGGGTTTTCTGCAACAGACCTCGCCTACACAAGCCACGGCGTTGA 1938 0.4174 MEPTKSRRYSTPTNSAPRIASKVISATLSQHITLRFRLNLQAVSARISLVMEKADSGQKLYTLMRLWEFPDQYVIEPTDGSSGSSLTVSRVDGSMKLIDAIPECNKLRVPKIWTVFGVVGMIRLLAGSYLLVITDRECVGSYFGHPIYKVSSMKVFPCDHSLNNTNAEQKKTELEFSKLLNIAEKTSGLFFSYDTNLTLGAQRLNDLGDESRLLPLWRQSEPRFLWNNYLLEVLIDNKLDPFLLPVVQGSFHYFQAAIGKDIIDVTLIARRCTRRNGTRMWRRGADPDGYVANFVETEQIMQFNGYTASFVQIRGSIPLVWDQIVDLTYKPKYELLRLEEAPRVMERHFLDLRKKYGTVLAVDLVNKHGGEGRLNEKFGSTIQHLASDDVRYLHFDFHHICGHVHFERLSILYDQISDFLERNGYLLLNEKGEKMKEQLGVVRTNCIDCLDRTNVTQSMIGRNMLEFQLRRLGVFEAEETITSHPNLDENFKIMWANHGDDISTQYSGTPALKGDFVRYGRRTMQGILKDGCSALMRYYLNNFCDGTKQDAIDLLQGHYIVSVSRDMTASFQKGGIEAIASFPLAFSLVMIGFVFATMSLREVRYDFRHFFFSLMWASISIGIAAFVRANGRVFCNRPRLHKPRR 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g1245 645 Pfam SacI homology domain 116 401 IPR002013 GO:0016791
Lele53g1245 645 ProSiteProfiles Sac phosphatase domain profile. 180 508 IPR002013 GO:0016791
Lele53g1245 645 PANTHER PHOSPHATIDYLINOSITIDE PHOSPHATASE SAC1 59 642 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g1245 Lele-ChrLele53 21071885 21082330 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g1245 59 644 Acyl Lipid Metabolism Gene Families AT5G66020 73.935 0.0 965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g0035 52 230511 235921 Lele53g1245 53 21071885 21082330 CCT
Lele53g1245 53 21071885 21082330 Lele53g1245 53 21071885 21082330 ECH
Lele53g1245 53 21071885 21082330 Lele55g0240 55 1472797 1482900 hybridization
Lele53g1245 53 21071885 21082330 Lele56g0229 56 1844110 1853420 hybridization