Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g1243 ATGGTTTCTACTTGTTGGATAGAATTCCCCAGAGAAGCATGTTGCAATTCACTTTTCGTTCGTTTTGTAGGATCAGCGAGTCCTGTGAGTAGGAATGTCGAGTCATTTACAACAAACAGCACTGTAGACAAGAGTCAATTCTCGATGATAGCAAATGGAAGCGTCGACGGATCCAATGCCTCTCTAAGTCGCCATGTTATAGAAACGCCTAATTACTTGAAGGTTTTCAGTTTTGGGGATTTGAAAGCAGCCACCAAGAACTTTAAATCGGATTCATTGCTTGGAGAGGGTGGTTTTGGTAAAGTTTACAAAGGTTGGTTGGATGAGAAGACGCTTTCGCCGGCCAAAGCTGGCTCTGGAATGACGGTCGCTATAAAAAAACTCAACCCTGAGAGTATGCAAGGCTTTCAAGAGTGGCAGTCAGAAGTGAACTTCTTAGGAAGCCTTTCTCACCCAAACCTGGTCAAGCTATTTGGTTACTGCTGGGAGGATGATGAACTTCTCCTTGTGTATGAGTTCATGCCTAAGGGAAGCTTGGAGAGTCATCTCTTCAGAAGGCCTACTGGAGAACAATCACACGTGACTACCAGGATCATAGGCACATATGGTTATGCTGCTCCAGAATATGTAGCCACAGGTTTGAAAGCACTGGATCCAAAGAGGCCATCTGGGCAGCATAATCTGGCTGAGTGGGGAAAGCCATGTCTCACCAGCAAAAAGAAGTTGAAAACCATAATGGATGCCAGAATACAGGGTCAATATTCACTCAGTGCAGCATTTGAAGCAGCTCAGCTTATTCTCAAGTGCCTAGAACCTGACCCCAAAAAACGCCCTGGAATGAAGGATGTAGTGGAGGTATTGCAAGGCATTGAAGCTGCCCAAAACAAGTCAAAAGGTTCCAAGAAATCCTGCCAATCTTCACATCATCATCATCATAAGAAGCCTTATTCATCACCGTTCAGTTCATGA 969 0.4458 MVSTCWIEFPREACCNSLFVRFVGSASPVSRNVESFTTNSTVDKSQFSMIANGSVDGSNASLSRHVIETPNYLKVFSFGDLKAATKNFKSDSLLGEGGFGKVYKGWLDEKTLSPAKAGSGMTVAIKKLNPESMQGFQEWQSEVNFLGSLSHPNLVKLFGYCWEDDELLLVYEFMPKGSLESHLFRRPTGEQSHVTTRIIGTYGYAAPEYVATGLKALDPKRPSGQHNLAEWGKPCLTSKKKLKTIMDARIQGQYSLSAAFEAAQLILKCLEPDPKKRPGMKDVVEVLQGIEAAQNKSKGSKKSCQSSHHHHHKKPYSSPFSS 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g1243 322 ProSiteProfiles Protein kinase domain profile. 88 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele53g1243 322 MobiDBLite consensus disorder prediction 302 316 - -
Lele53g1243 322 Gene3D Transferase(Phosphotransferase) domain 1 177 315 - -
Lele53g1243 322 FunFam Serine/threonine-protein kinase BIK1 32 173 - -
Lele53g1243 322 Gene3D Phosphorylase Kinase; domain 1 72 173 - -
Lele53g1243 322 SUPERFAMILY Protein kinase-like (PK-like) 64 287 IPR011009 -
Lele53g1243 322 MobiDBLite consensus disorder prediction 291 322 - -
Lele53g1243 322 PANTHER OS01G0588500 PROTEIN-RELATED 57 185 - -
Lele53g1243 322 Pfam Protein tyrosine and serine/threonine kinase 91 190 IPR001245 GO:0004672|GO:0006468
Lele53g1243 322 ProSitePatterns Protein kinases ATP-binding region signature. 94 127 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g1243 Lele-ChrLele53 21064131 21066966 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g1243 187 287 Glycoside Hydrolase AT3G07070 29.508 5.04e-15 73.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele53g1243 PK_Tyr_Ser-Thr 1.2e-18 CL0016