Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g1232 ATGAAAATGAACGAAAGCGATGCTCCAGGTGCGACCATGGAGAATGGGGACACATTGGGCAATTTAAATTCCACTGGGAAGCCTCCTAGAGACGCTTCCTCCATGCGTCATTGCACCAGCTCTACCATCCTCACCGATTCGGAAGCAGATATTGTGAGGGTAGACTCGAAAACAGCGACGTGGTCGACGACGACGAAAGAGGACAAATCGGAGTTCTCACCCATATTCAGATCGGGAAGCTGTTCTGAGAAAGGACCGAAACAGTACATGGAGGATGAGTTCATCGCTGTTGATATTCTCCTTGAAAGCCTTCCTTCTCCTGCAGCATTCTACGGGATATTTGATGGGCACGGAGGTACAGATGCAGCCTTATTTACGAGAAAGAACATCCTCAAGTTCATCAGCACAGAGCCACACTTCCCTCAAAGCGTCACAAAGGCCATCAAGAGTGCCTTTGTCAAGGTCGATCACGCCTTAGCCGATGCCATTTCTCTCGATACTTCTTCTGGCACCACTGCTTTAATAGCCCTAATGACCGGAAGGTAA 546 0.489 MKMNESDAPGATMENGDTLGNLNSTGKPPRDASSMRHCTSSTILTDSEADIVRVDSKTATWSTTTKEDKSEFSPIFRSGSCSEKGPKQYMEDEFIAVDILLESLPSPAAFYGIFDGHGGTDAALFTRKNILKFISTEPHFPQSVTKAIKSAFVKVDHALADAISLDTSSGTTALIALMTGR 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g1232 181 ProSitePatterns PPM-type phosphatase domain signature. 110 118 IPR000222 GO:0043169
Lele53g1232 181 Gene3D - 56 181 IPR036457 -
Lele53g1232 181 MobiDBLite consensus disorder prediction 1 39 - -
Lele53g1232 181 ProSiteProfiles PPM-type phosphatase domain profile. 77 181 IPR001932 -
Lele53g1232 181 PANTHER PROTEIN PHOSPHATASE 2C 64 178 IPR015655 GO:0004722|GO:0006470
Lele53g1232 181 Pfam Protein phosphatase 2C 78 180 IPR001932 -
Lele53g1232 181 MobiDBLite consensus disorder prediction 16 39 - -
Lele53g1232 181 SUPERFAMILY PP2C-like 65 180 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g1232 Lele-ChrLele53 21001650 21002383 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g1232 17 181 PP2C-type Phosphatase Gene Family AT2G33700 51.136 1.53e-47 157