Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g1230 ATGGTTAACGTTTGGCTTGTGATGTTAATGGTCCTCTCTAATGGGCTTTCTTCATCTGGGGCTGGCATGAATGATTCAGGAATACCTGAATTTGTAAATATTGGAACACTCTTCTCTTTCAATACCACTGTGGGTAGAATCGTAAAAGTAGCTATTGAAACAGCGGTTGCGGACATAAATTCCAATCCTTCCATTCTTGGCATAACTAAGCTGAGGGTCTCAATGCAAGAGGACTCCAAATACAGAGGTTTTCTGAGCATTTCTGAGGTCTTTCAGCTCATGGAAAGACACACTGTGGCTATAATTGGTCCCCAGACATCTATAACAGCTCATGTCATATCTCATGTTGCAAACGAGCTCCAAGTTCCACTTCTGTCATTTTCAGCCACAGACCCTACACTTTCTTCACTTCAATTCCCATTCTTTGTTAGAACTGCTCCTAGTGATATTTATCAGATGACTGCAATTGCCGAGCTTATAGACTTCTATGGGTGGAGAGAAGTTATCGCAATTTATGCCGACGATGACCATGGGAGGAACGGGATTGGTTCTTTAGGGGATAAGCTTGCTGAGAAACGTTGTAAAATCTCATATAAAGCACCAATAAGCCCTGAAGCAACTAGAGAGGAGATTACTGATGCGCTTGTTCAGGTGGCTCTTGCTGAATCTCGGATTATAATTCTTCACACTTATGCTGCTTGGGGCCCCCAGGTGTTTGATGTGGCCAAATATCTTGGGATGATGGGAACTGGGTATGTCTGGATAGCCTCCAACTTTCTCACTACTCTTCTGGACTCTGAGAGTCTCATCCCTTCAGATCAAATAGATGAATTTCAAGGAGTTCTTACACTGCGTGTGCACACACCCGATTCAGAGCTCAAGAGAAGGTTCTTTTCTAGGTGGAAAAACCTAACTAGCGGAATGACTGCTGATGGTCCACTTGGATTGAACACTTTTGGTCTCTATGCGTATGATACTGTTTATATGCTTGCTCGTGCACTTGATACATTTTTCAAACAAGGGAACCGAATCACATTCTCATATGATTCAAAGTTATCTCAACTACGTGGAGACAGCTCGCATCTTGATGCAGTGAACATCTTTGATCAAGGAAATCTGTTGCGTGCAAGTATTTATGGGGTTAACATGACTGGGGTAACAGGTCATATTAAGTATGCAGCTGATGGGAATCCAATGAATCCATCATATGAAATCATCAATGTGATAGGAACAGGTGCAAGGAGGATTGGTTATTGGTCTAATCACTCTGGATTATCTGTTGATCCTCCAGAAGTACTTTATTCAAAACCAGCCAATCGTTCCAGTGCAAATCGAAAGCTACTCCCTGTGATCTGGCCTGGAGAAACAACCCAGAAGCCCCGTGGTTGGGTTTTTTCAAACAATGGAAGGAACTTAATAGTTGGAGTACCAACAAGGGTTAGCTACCGACCATTTGTCTCACAAATGCAAGGCACTGACATGTTCAAGGGATTCTGCATTGATATATTCCTTGCTGCAGTGAACTTATTGCCCTATGCGGTTTCCTACAAGTTTATTCCATTTGGGGATGGTCGCAGTAATCCTAGTAACACTGAGCTTGTTCGTCTGATCACGGCTGGCGTCTTTGATGCTGCAGTGGGTGACATTACGATTACAACAGAAAGAACAAAGATGGTGGATTTTACTCAGCCATATATCGAGTCAGGTCTAGTAGTCGTAGCACCTGTTAAGAAGGTAGAATCCAATGCGTGGGCTTTTCTGAGGCCATTTACGCCGATGATGTGGGGTGTTACAGCAATCTTGTTCTTAGCCGTCGGATTTGTTGTTTGGATCTTGGAGCATAGGCTGAATGATGATTTCCGAGGACCTCCCAAAAAGCAAGTTGTGACAATTTTGTGGTTTAGCTTTTCAACTATGTTCTTTTCTCACAGGGAAAATACAGTGAGCACACTTGGTCGCTTTGTGGTACTTATATGGCTATTTGTGGTTCTGATAATTAATTCAAGTTACACAGCAAGTCTGACCTCAATCCTCACAGTACAACAGCTTTCTTCGCCCATTAAAGGCATCGAAAGTTTAGTAAACAGCAAAGAACCTATTGGGTACTTGCAGGGTTCTTTCACTGGAGATTACTTAGTTGAGGAAGTTGGCATTCATGAGTCAAGACTCGTTCCTTTGAAAACAGAAGATGAGACTGCTAAAGCATTAAAAGCCGGACCCAACAAAGGCGGTATTGCTGCATATGTCGATGAGCGTGCTTACATTGAGCTCTTCCTTTCAAGCCGGTGTGATTTTACTATTGTAGGTCCAGAGTTCACCAGAAATGGTTGGGGATTTGCCTTTCCTAGAGACTCTCCTTTAGCAGTTGACGTTTCAACGGCGATTCTGGAACTGGCAGAGAATGGAGATCTTCAAAGGATCCATGACAAATGGCTTTTGAACAGGGCTTGCCTAGCACAAGGTGCAAAGCTTGAAGTGGACAGACTTGATCTTAAATCCTTCTGGGGTCTTTATTTGGTGTGTGGACTAGCTTGCTTGCTGGCTCTCCTCATCTATCTCATACAGATGATGAGACAGTACACCAAACACTATTCCGATGAAACCGAGTCCTCCGGCCAGAGCTCAATTTCCACGCGCCTCCGGACTTTCCTGACGTTCGTGGACGAGAAAGAGGAAGTTAAGCATCGGTCCAAGAGAAGGCAACTGGAAAGGATCTCATCCAGAAGCAGCAGCACTGTGGGTGGATCATTGTCATCTTCAACCATATACTCCTCCAACAAAGATTATGTTCAATCCTCTTCAAACAAAAGCATTGATTGTGCTTATGATGCCTGA 2835 0.4349 MVNVWLVMLMVLSNGLSSSGAGMNDSGIPEFVNIGTLFSFNTTVGRIVKVAIETAVADINSNPSILGITKLRVSMQEDSKYRGFLSISEVFQLMERHTVAIIGPQTSITAHVISHVANELQVPLLSFSATDPTLSSLQFPFFVRTAPSDIYQMTAIAELIDFYGWREVIAIYADDDHGRNGIGSLGDKLAEKRCKISYKAPISPEATREEITDALVQVALAESRIIILHTYAAWGPQVFDVAKYLGMMGTGYVWIASNFLTTLLDSESLIPSDQIDEFQGVLTLRVHTPDSELKRRFFSRWKNLTSGMTADGPLGLNTFGLYAYDTVYMLARALDTFFKQGNRITFSYDSKLSQLRGDSSHLDAVNIFDQGNLLRASIYGVNMTGVTGHIKYAADGNPMNPSYEIINVIGTGARRIGYWSNHSGLSVDPPEVLYSKPANRSSANRKLLPVIWPGETTQKPRGWVFSNNGRNLIVGVPTRVSYRPFVSQMQGTDMFKGFCIDIFLAAVNLLPYAVSYKFIPFGDGRSNPSNTELVRLITAGVFDAAVGDITITTERTKMVDFTQPYIESGLVVVAPVKKVESNAWAFLRPFTPMMWGVTAILFLAVGFVVWILEHRLNDDFRGPPKKQVVTILWFSFSTMFFSHRENTVSTLGRFVVLIWLFVVLIINSSYTASLTSILTVQQLSSPIKGIESLVNSKEPIGYLQGSFTGDYLVEEVGIHESRLVPLKTEDETAKALKAGPNKGGIAAYVDERAYIELFLSSRCDFTIVGPEFTRNGWGFAFPRDSPLAVDVSTAILELAENGDLQRIHDKWLLNRACLAQGAKLEVDRLDLKSFWGLYLVCGLACLLALLIYLIQMMRQYTKHYSDETESSGQSSISTRLRTFLTFVDEKEEVKHRSKRRQLERISSRSSSTVGGSLSSSTIYSSNKDYVQSSSNKSIDCAYDA 944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g1230 944 MobiDBLite consensus disorder prediction 906 923 - -
Lele53g1230 944 FunFam Glutamate receptor 467 583 - -
Lele53g1230 944 CDD PBP1_GABAb_receptor_plant 33 429 IPR044440 -
Lele53g1230 944 SMART GluR_14 473 814 IPR001320 GO:0015276|GO:0016020
Lele53g1230 944 Gene3D - 583 708 - -
Lele53g1230 944 Pfam Receptor family ligand binding region 49 410 IPR001828 -
Lele53g1230 944 MobiDBLite consensus disorder prediction 898 923 - -
Lele53g1230 944 Gene3D - 475 582 - -
Lele53g1230 944 SUPERFAMILY Periplasmic binding protein-like I 27 463 IPR028082 -
Lele53g1230 944 SUPERFAMILY Periplasmic binding protein-like II 447 814 - -
Lele53g1230 944 CDD GluR_Plant 472 812 - -
Lele53g1230 944 FunFam Glutamate receptor 583 713 - -
Lele53g1230 944 Pfam Ligand-gated ion channel 813 845 IPR001320 GO:0015276|GO:0016020
Lele53g1230 944 SMART AABind_6 471 815 IPR001638 -
Lele53g1230 944 Gene3D - 754 819 - -
Lele53g1230 944 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 32 880 - -
Lele53g1230 944 Gene3D - 50 400 - -
Lele53g1230 944 Gene3D - 148 425 - -
Lele53g1230 944 FunFam Glutamate receptor 709 816 - -
Lele53g1230 944 Pfam Bacterial extracellular solute-binding proteins, family 3 478 812 IPR001638 -
Lele53g1230 944 PIRSF IGluLR_plant 1 941 IPR017103 -
Lele53g1230 944 PRINTS Metabotropic glutamate GPCR signature 152 168 IPR000337 GO:0004930|GO:0007186|GO:0016020
Lele53g1230 944 PRINTS Metabotropic glutamate GPCR signature 101 127 IPR000337 GO:0004930|GO:0007186|GO:0016020
Lele53g1230 944 PRINTS Metabotropic glutamate GPCR signature 133 152 IPR000337 GO:0004930|GO:0007186|GO:0016020
Lele53g1230 944 PRINTS Metabotropic glutamate GPCR signature 168 185 IPR000337 GO:0004930|GO:0007186|GO:0016020
Lele53g1230 944 FunFam Glutamate receptor 148 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g1230 Lele-ChrLele53 20987701 20991522 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g1230 5 911 Ion Channels AT3G51480 59.385 0.0 1145