Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g1228 ATGGGTGATGAAGAAAGTGGAGGGAATTCTGTAGCAACCTCTTGTCCAAGTGCATTAATAAACTGGTGGGATGTTCATGCAACTTCACCTTCTTCCTGGAACAGCCATCATCATCCTGCAGCTGCAAACCCTAATTCTAATGAAGACCATGATATTTCACTCTCTACATCTTTCTCCAACTCCTCTAACCAATCCAATTCCTTCATGCCAGAACAACCTTCAGACAATCACCTTTGGACTCACGTCTTACTAGGTGTTGGGAGCAACGAGGAGCTACAAAATAGCCAAGGTGGTGGAGAGAACTTGATGGATGCACTGTCCTCAAAAAGCATCATGTACGAAGAACCAGCCTGCAACTACTTGAAGAAACTCGACAATAATAATTCTTCATCAATCAACACTAGTTTCGATCATCATCACAGACAATTGAATGGTTTCAACGGCGAGGCCGTGCTTGAGAATCATTCTGGGTTTTTCTCTTCATACGCTGCTCTTGATCACATGAAGGTTAAGCAAGAACATCATCATCATCATGCAAGTGATCAAGCACCGCCACAAGGTGGTTTATTCGGATATCAAAATAATAATGGATTTAACAGTACTCATCATCAGTATGGGATGGTGCCCAGTTTGTCTTCATCGTGTTCGAGAGATTTGACAGATGTAATATCTTTTACCGGAAGGATAGGTCGGCCGATCATCGGAATTCATCATGCACTGAAACCCACTTTCAGGCCAACCTTGACGACTGTATCTGACTCCAAGAAGCAGCTTTTTCACACATCATTGCCGACAAGGACAAGCAATGGAAGAGGACAAGGGAGCTCCACTGAAGTAAAGAAGAAAAGAACGGATGACTCATCAGAAGCAATCTCGAAGAAACCAAAGCAAGAGACATCTACAGCATCTTCTAATACAAAGACAGACACCGCATCGGTGCTTTTCGAAGCAATTGGGTACATAAAGTTTTTACAAGAACAAGTACAGGTGGCTTACAGAGACAACACTGCTCCTGATTACTGGACTCCTGCTTACCGAGGTTGCTTGTTTAGGTAA 1056 0.4309 MGDEESGGNSVATSCPSALINWWDVHATSPSSWNSHHHPAAANPNSNEDHDISLSTSFSNSSNQSNSFMPEQPSDNHLWTHVLLGVGSNEELQNSQGGGENLMDALSSKSIMYEEPACNYLKKLDNNNSSSINTSFDHHHRQLNGFNGEAVLENHSGFFSSYAALDHMKVKQEHHHHHASDQAPPQGGLFGYQNNNGFNSTHHQYGMVPSLSSSCSRDLTDVISFTGRIGRPIIGIHHALKPTFRPTLTTVSDSKKQLFHTSLPTRTSNGRGQGSSTEVKKKRTDDSSEAISKKPKQETSTASSNTKTDTASVLFEAIGYIKFLQEQVQVAYRDNTAPDYWTPAYRGCLFR 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g1228 351 MobiDBLite consensus disorder prediction 259 306 - -
Lele53g1228 351 MobiDBLite consensus disorder prediction 171 195 - -
Lele53g1228 351 MobiDBLite consensus disorder prediction 31 74 - -
Lele53g1228 351 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 303 341 IPR036638 GO:0046983
Lele53g1228 351 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 271 324 IPR011598 GO:0046983
Lele53g1228 351 MobiDBLite consensus disorder prediction 276 293 - -
Lele53g1228 351 CDD bHLH_AtbHLH_like 306 330 IPR045239 -
Lele53g1228 351 MobiDBLite consensus disorder prediction 259 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g1228 Lele-ChrLele53 20975011 20977510 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g1228 278 329 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 46.154 5.49e-06 46.2