Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g1222 ATGGCATCGACTGCACCAAACCCCCTTTTGAGGGTGAAGGAGATACAAGGGAGAGGAAGGGGGATAGTTGCATCTCAACCTCTTAAATCTGGCCAAGTTGTTGTTAGAGATTCTCCTATCGTGATGTATTCTGCTATGCCTTTGAGCCCACAGTCATCATCCACCTCCTCTTCTCCAAGCTTCTGTGACCACTGTTTCAGAACCTTACCAGGTCCATCTTCAATGGGCGGTCCTTCATCTTCCTCAGTTCTGTGCCCTTCTTGTGGGCACCATCGTTTCTGTAGCGCAAAATGTCTATCGGTTGCCCAAAATACATCCCACACTTCTTGGGTATGTCAAGCATTATCTCATCTCCGAGTCAATTCTGCACTGCTTGAACAACCCCTTGAATGTCAAGTCCAAGTGCATTTTGTCATTGCCGCCTACAATCTTGCCAATGTCTCCCCATCGGATTTTCAAACTTTGCTTGCTCTTCACGGTTCTCCTGATGATACTACAATTGCTACAGCTCAGTTCCTGCACTCCCTTATTACCTCCCTCTCTCCATTTGCTCCAACTAGTAATCAGAATGGATTTTCCTTGGAACTCACTGCTGCCCTGTTGGCCAAGGATAAATTCAATGCATTTGGCTTGATGCAACCCTTCTCTGAAGATAATGACCAGAGATCTGTCAGAGCTTATGGTATATACCCTTATGCCTCCTTCTTTAACCATGATTGCCTTCCCAATGCCTGCAGATTTGATTATGTGGATACTAGTGCAACGGATGACAACCATAACACTGACATTATCATTAGGATGATCCATGATGTTCCTCAAGGTAGGGAGCTCTGTTTGAGTTATTTCCCTGTGAATGAAAATTATTCTAGTAGGCAGAAAAGACTGGCGGAAGACTATGGCTTCACCTGTAAGTGTGATCGATGTAATGTCGAAGCAAATTGGTCAGATAACGATAGTGTTGAGGATGATGCTGAGTATGTTGAAGAGGCGATGGAAGAGGATGAATGTGAAAATATGGCGGCTTCTGACACTGAAAGTAATCTGCAAGGAGATAACAGTGATTTTCCCCATGCATATTTCTTTTTGAAATTCATGTGTGATAGAAAGAATTGCTGGGGTACTTTAGCTCCTTTACCTACAGAGGGTAATACTCAGTCCAATGTTATGGAATGTAATGTCTGTGGCAACTTGAAGAGCGACAATGTCCTTGATGGTGGTGGAGGACAAGATGGAGTTTCCATGGATGACTGA 1251 0.4404 MASTAPNPLLRVKEIQGRGRGIVASQPLKSGQVVVRDSPIVMYSAMPLSPQSSSTSSSPSFCDHCFRTLPGPSSMGGPSSSSVLCPSCGHHRFCSAKCLSVAQNTSHTSWVCQALSHLRVNSALLEQPLECQVQVHFVIAAYNLANVSPSDFQTLLALHGSPDDTTIATAQFLHSLITSLSPFAPTSNQNGFSLELTAALLAKDKFNAFGLMQPFSEDNDQRSVRAYGIYPYASFFNHDCLPNACRFDYVDTSATDDNHNTDIIIRMIHDVPQGRELCLSYFPVNENYSSRQKRLAEDYGFTCKCDRCNVEANWSDNDSVEDDAEYVEEAMEEDECENMAASDTESNLQGDNSDFPHAYFFLKFMCDRKNCWGTLAPLPTEGNTQSNVMECNVCGNLKSDNVLDGGGGQDGVSMDD 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g1222 416 Pfam SET domain 19 281 IPR001214 GO:0005515
Lele53g1222 416 Gene3D SET domain 21 308 IPR046341 -
Lele53g1222 416 SUPERFAMILY SET domain 7 309 IPR046341 -
Lele53g1222 416 SMART set_7 8 288 IPR001214 GO:0005515
Lele53g1222 416 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR2 1 403 IPR044238 -
Lele53g1222 416 ProSiteProfiles SET domain profile. 8 282 IPR001214 GO:0005515
Lele53g1222 416 CDD SET_SMYD 206 308 - -
Lele53g1222 416 Gene3D - 61 121 - -
Lele53g1222 416 Gene3D - 126 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g1222 Lele-ChrLele53 20934121 20935371 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele53g1222 SET 5.8e-12 No_clan