Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g1203 ATGGATTATTCCTGCGAGACGGAGATCCTAATTTTACAGGGTGAGGAGAAGCTACGAATCTTTCATGGTGCCGAGAGCTCCCAAGTCTTGCCTGTGGATCATACTGTGCAAGGCTTTAATGGCTTATCCCCACCCTTAAGCCGTCCAAGTCGATCTATTCTGTCCTTTTCACCGAAGCCCAGTACGACCCTTGTTGCTACCCTAGATGGGACAATATACTTGGTGGAGATTGGTTCTATGAGGGTAATATGGTCATTTCCTACCGGATCACCAATCTACCATTCATATCAAGCTCCTCTCAACATGGATAATGTTAAAGAAAATGTGTGTGGATTGGCTAGCAGGTTCATGGAATGTGGAGATGATTGGGCACTATATATCCAAAGCAAGCACTTTGGTAAAATGAGACTCGCAACATCTGTGGCAGATTTTGTTGCCGCTACACCTACCTTTTCAGATGATGGAGGTGTTATTCTTGGATCCAAAAGAAGTACTTTGTTTGAAATTGACGCTATAAGTGGAAAGCTCATTCGAAACTATGCTGCTGATAATCTTTCTGCGCTGTGGAGTAATGACATGCATAGGGGAACAAATATTGTCAGTACAAAGAATAAAGGGTTGGCCGGTCCTGCAATGCTAAGCACACCGGAGCTTCTGCTTAAAATAATTAGAACAGATTATTCTCTACAAGGTGTAGGCCCTAGATCTGGAAAAGTTTTGTGGACTATGAATGTAGCTGAATTTAAGGCTTCCTTATTCTGTGGAAATAATGAAAATCTGTTTACTGGGGCTTCATTAGATTCAGAGGATAAATATGCCTCCAACAATGACTTGGATTTTGCTATGCCATATGCTTGTCATGAGTTAAAAGAAGTACATCGCTTGCAAAAGAATCTTCTTTTTGGTGATCTCACTGAAAGTTTACCTAGAGCCTATTATGATAAGGAAATGCTTCCAGAGCCTAATTCAGAGCTGATGCTTCTTCCACAATCTAATTTAGATACTTCATTAAATCAACATGATGATAATATGAAGCTTCCTACTTTTCCAGATGTGTTGCCTTCTTTACCTCAAAACTTTAATCCCCATGACAGTGATGGTAATGCAGCCACTCTTTCTCAACCTCCCTCAGAGATTAGTGCACGAGGGGAAGTTTATATAAAGAAGGTGATAGAATGGCCAAGATCATATTTATTATTGTTTATGATCTTACCTCTGGGTCTTTTGATGTACAATCTTCTAGTGGTCAAAAAGCCAGTTATGTCAGTGGTCCAGAATGGTGGATCTGAAATAAAAGTTTCTCCTCTTAAGAAAAAAAGAGCCCGTAAGTCTGGAAAAACCAATGGCATTGATGACAAAAGAAATAAGCATCTATCATCAGAAGATGAGGATGTAACGGCTAGTAGCAAAATTGCTAGGGAAGCATTGCCAAATGTTGAAAAAGTTGAGGGAGCCAATGGACATCAAATCGGTAAACTCTTTGTATCAAATGAAGAAATCGCCAAGGGAAGTAACGGTACGATAGTCCTTGAGGGAACGTATGAAGGTCGGGCAGTTGCTATCAAGCGTTTGGTCCAATCCCATTATGATATTGCTGTTAAAGAAATTCAAAATCTTATTGCATCTGATCATCATCCTAACATTGTCCGATGGCATGGGGTTGAATTTGATCAAGATTTTATATATCTTTCTCTGGAACGTTGTATATGCAATTTAGATGATTTGATTCAGATTTATTCAGATTGCTATTCAAAACCAGTGTCTAGTAAAAACCAATCTTATGAATGTTTGAAGGTCCAAATAAAGATGGGAAAGGATAACATGCAAGAGCTTTGGAAAGCAAATGGCTATCCATCCTCTTTATTATTGAAGTTGATCAGGGATATAGTTTCTGGACTTGCTCATTTACATGACTTGGGAATCATACATCGTGATTTGAAACCTCAGAATATTTTGATAACTAAGGAAAGACATTTAGTTGCAAAAGTTTCTGACATGGGCATCAGCAAACGCCTTCTTGGAGATATATCATCCTTTAGTCATAATGGTACTTGTTGTGGCAGTTCTGGTTGGCAAGCACCCGAACAGCTTCTTCAAAGACGTCAAACGAGAGCAGTAGATTTATTTAGTCTAGGATGTATTCTCTTCTTTTGCATAACTAAGGGAAGACATCCATTTGGAGAGCGTCTTGAACGTGATTTCAATATTGTGAAAAATAAAAAGAACCTTTCTCCAGTGGAATTCATTCCTGAGGCTGAAGATCTTATTGTTGGTTTATTAAACCCTACTCCTAAGTTAAGGCCAAAGGCTGTTGAAGTGCTGCATCATCCTTTCTTCTGGAGTTCTGAGATGAGACTCTCATTTCTTCGTGATGTTAGTGATAGGGTGGAACTAGAAGATAGGAAGATTAATTCTAATCTTTTAATGGCATTAGAAAGTATTGCGCCAAAGGCTTTAGATGGTGCAAATTGGGATAAAAAGATGGAACCTGTCTTCATTGCTAACATTGGCCAATACAGGCGATATAAGTTTGACAGTGTTCGTCACTTGTTGCGAGTTATGAGAAACAAGTTGAATCATTATAGAGAATTGCCTCAAGAAATTCAGCAACTTCTAGGACCTGTTCCAGAAGGATTCAATGAATACTTTGCTAGTCGATTTCCTAGACTCTTAATTAAAGTGTATAAAATTGTACATAAATATTGCGAGCAGGAGGAATGTTTCCAAAGGTATTTTAAAAATGTTGATTAG 2751 0.3864 MDYSCETEILILQGEEKLRIFHGAESSQVLPVDHTVQGFNGLSPPLSRPSRSILSFSPKPSTTLVATLDGTIYLVEIGSMRVIWSFPTGSPIYHSYQAPLNMDNVKENVCGLASRFMECGDDWALYIQSKHFGKMRLATSVADFVAATPTFSDDGGVILGSKRSTLFEIDAISGKLIRNYAADNLSALWSNDMHRGTNIVSTKNKGLAGPAMLSTPELLLKIIRTDYSLQGVGPRSGKVLWTMNVAEFKASLFCGNNENLFTGASLDSEDKYASNNDLDFAMPYACHELKEVHRLQKNLLFGDLTESLPRAYYDKEMLPEPNSELMLLPQSNLDTSLNQHDDNMKLPTFPDVLPSLPQNFNPHDSDGNAATLSQPPSEISARGEVYIKKVIEWPRSYLLLFMILPLGLLMYNLLVVKKPVMSVVQNGGSEIKVSPLKKKRARKSGKTNGIDDKRNKHLSSEDEDVTASSKIAREALPNVEKVEGANGHQIGKLFVSNEEIAKGSNGTIVLEGTYEGRAVAIKRLVQSHYDIAVKEIQNLIASDHHPNIVRWHGVEFDQDFIYLSLERCICNLDDLIQIYSDCYSKPVSSKNQSYECLKVQIKMGKDNMQELWKANGYPSSLLLKLIRDIVSGLAHLHDLGIIHRDLKPQNILITKERHLVAKVSDMGISKRLLGDISSFSHNGTCCGSSGWQAPEQLLQRRQTRAVDLFSLGCILFFCITKGRHPFGERLERDFNIVKNKKNLSPVEFIPEAEDLIVGLLNPTPKLRPKAVEVLHHPFFWSSEMRLSFLRDVSDRVELEDRKINSNLLMALESIAPKALDGANWDKKMEPVFIANIGQYRRYKFDSVRHLLRVMRNKLNHYRELPQEIQQLLGPVPEGFNEYFASRFPRLLIKVYKIVHKYCEQEECFQRYFKNVD 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g1203 916 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 47 246 IPR011047 -
Lele53g1203 916 Gene3D - 43 277 IPR015943 GO:0005515
Lele53g1203 916 SMART serkin_6 494 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele53g1203 916 Gene3D Phosphorylase Kinase; domain 1 479 566 - -
Lele53g1203 916 PANTHER IRE1-RELATED 136 914 IPR045133 GO:0004521|GO:0004674|GO:0030968
Lele53g1203 916 ProSiteProfiles Protein kinase domain profile. 494 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele53g1203 916 FunFam Serine/threonine-protein kinase/endoribonuclease IRE1a 604 781 - -
Lele53g1203 916 ProSiteProfiles KEN domain profile. 782 914 IPR010513 GO:0004540|GO:0006397
Lele53g1203 916 Pfam Protein kinase domain 496 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele53g1203 916 Pfam Ribonuclease 2-5A 785 912 IPR010513 GO:0004540|GO:0006397
Lele53g1203 916 ProSitePatterns Serine/Threonine protein kinases active-site signature. 641 653 IPR008271 GO:0004672|GO:0006468
Lele53g1203 916 MobiDBLite consensus disorder prediction 445 466 - -
Lele53g1203 916 SUPERFAMILY Protein kinase-like (PK-like) 494 784 IPR011009 -
Lele53g1203 916 Gene3D KEN domain 782 916 IPR038357 -
Lele53g1203 916 MobiDBLite consensus disorder prediction 434 466 - -
Lele53g1203 916 SMART PGNneu 845 899 - -
Lele53g1203 916 FunFam Putative Serine/threonine-protein kinase/endoribonuclease IRE1 486 566 - -
Lele53g1203 916 FunFam Serine/threonine-protein kinase/endoribonuclease IRE1 783 916 - -
Lele53g1203 916 Gene3D Transferase(Phosphotransferase) domain 1 601 781 - -
Lele53g1203 916 CDD RNase_Ire1 783 912 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g1203 Lele-ChrLele53 20813820 20818618 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g1203 500 778 MAP Kinase Kinase Kinase AT1G09000 25.085 2.76e-19 91.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK IRE1 Lele53g1203 Pkinase 2.1e-37 CL0016