Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g1199 ATGCTTTCCCTCCAATGCAGCAGCAAGCATCATCATCCTCATCATTATCAGCCGCAACGCCGCCTCAAGCCTGACATGAATCCACTGCCATGCTTCTCCCTCTCCCCCTCCGCCGCCGTCGCCGTCATATGTATTCTGCAACTTCTCTTCCCGGCGGTGATGTCCCAACCCCAGAACATGAGAACAACCCCATACGTCTTCGGCCCCTTCGACGTCTCTAACTACACAACCTTGAAAGTCATACAACCGGCGTCGATCAACTTCGGAGCCCTCCAAATAACTCCGGACACCGCCGGCAACGTCCCCCTTGCAAACACCTCCGGCCGAATCCTCTTCCGGGAACCCTTCACACTCTGGGAAGACAACGGCAAAGTGGCTTCCTTTAACACTTCATTCCTCATCAACGTCTATCGCGTCAACAACGCCACTCCCGGCGAAGGCGTCGCCTTCGTCATTGCCCCATCCCTCGACCTTCCCCGAAACAGCCATGGCCAATACCTCGGCCTCACCAACTCTACCACCGACGGCAGCTCGGACAACCACATCATCGCAGTCGAACTAGACACCGTGAAGCAAGACTTCGACCCCGACGACAACCACATCGGACTTAACATCAACAGCGTCAAATCAAAAACCAACGTCTCACTGTCTCAATTCGGAATCCAGATCGCTCCAGACAGTGCCAAATACTATGTAATCTGGATAGACTACAACGGTTCAAGCAAGAAAATTAACATATTCATCAATGAACAACCCGACAGAAACGCACCCACAGTATCAAAACCTGAAGAACCAGTGTTAACTTCAGATCTAGATCTCAAAACCATCGTGAAACAGAGCTCTTACTTTGGTTTCTCTGGTTCCACCGGAATAACCTACCAGTTAAACTGTGTTCTGAGATGGAACATGACGGTGGAGGTTCTCTCAGAAAACAAGAACAAGTCGCGATCTTTGAAGATGGGCTTTGGCATTGGGGTGCCACTGATGGCTTTGATTCTCGTGGGAATTGGTGGGTCAGTGTATTATGCTTATAAGAAGAAGAGAAGAAGGTTGGACGATGAACAGATTCTGGGGACGTTGAAGAGCTTGCCGGGAACGCCGAGAGAGTACTCGTTCAAGGAATTGAAGAAGGCGACGAACAATTTCAGCGAGAAGAACAAGCTCGGAGAAGGAGGTTATGGGATGGTATACAGAGGGATTTTGCAGAAGGAGAATAATTTGGAAGTTGCAGTGAAGAAATTCTGCAGAGATAAGATGAAATGCAAAGATGATTTCTTAGCTGAACTCTCCATTATCAATCGTCTTCGTCATAAGCATCTTGTGAGGTTACTAGGTTGGTGCCACAAGCATGGGGTGTTAGTGTTGGTGTATGAGTTCATGCCCAATGGAAGCTTAGACAATCACCTTTTCTTTGAGGAAGGAAAACCCACAACAACACCTCTAAGTTGGAACCTACGTTACAAAATCATCACCGGCGTTGCTTCAGCGCTTAACTACCTTCACAACGAGTACGACCAAAAAGTAGTTCACAGAGATCTCAAAGCCAGCAACATCCTGTTGGACTCTGACTTCAACGCTCGCCTAGGCGACTTTGGCCTAGCTCGAGCCATTGAGCACGAGAAAACCTCGTACGCCGAGGTCGAAGGAATCCACGGCACGATGGGCTACATTGCACCTGAGTGCTTCCACACGGGGAAGGCAACCCGTCAATCAGACGTGTTCAGTTTTGGAGCGGTTCTTCTGGAAGTGGTGTGTGGCGAGAGGCCATGGACGAATAAAGAAGGGTTTCAGTTGCTGGTGGATTGGATTTGGTATTTGTATGGCGAAGGAAGGATTCTCGAGGCAGTGGACAAAAGGCTTGGGAATGAGTATGAGGTTGAAGAAGCAGAGAAAATATTGAAATTAGGGTTAGCCTGTTCTCATCCAATAGCTGGTGAGAGGCCAAAGATGCAAAGCATAGTGCAGATTATAAGTGGGGCAGGGCCAGTGCCTTATGTGCCTGCAAGTAAGCCTGCATTTATTTTTCCAGCTGTGGATTTTGGAAGCTTTATTAGTGATCTCACAACACCATCTTCAACCACTGTGAACACACCTCTTCATACAGATTCAGATCCTCTGCATTCAAATTCATCAAAGTGA 2139 0.4839 MLSLQCSSKHHHPHHYQPQRRLKPDMNPLPCFSLSPSAAVAVICILQLLFPAVMSQPQNMRTTPYVFGPFDVSNYTTLKVIQPASINFGALQITPDTAGNVPLANTSGRILFREPFTLWEDNGKVASFNTSFLINVYRVNNATPGEGVAFVIAPSLDLPRNSHGQYLGLTNSTTDGSSDNHIIAVELDTVKQDFDPDDNHIGLNINSVKSKTNVSLSQFGIQIAPDSAKYYVIWIDYNGSSKKINIFINEQPDRNAPTVSKPEEPVLTSDLDLKTIVKQSSYFGFSGSTGITYQLNCVLRWNMTVEVLSENKNKSRSLKMGFGIGVPLMALILVGIGGSVYYAYKKKRRRLDDEQILGTLKSLPGTPREYSFKELKKATNNFSEKNKLGEGGYGMVYRGILQKENNLEVAVKKFCRDKMKCKDDFLAELSIINRLRHKHLVRLLGWCHKHGVLVLVYEFMPNGSLDNHLFFEEGKPTTTPLSWNLRYKIITGVASALNYLHNEYDQKVVHRDLKASNILLDSDFNARLGDFGLARAIEHEKTSYAEVEGIHGTMGYIAPECFHTGKATRQSDVFSFGAVLLEVVCGERPWTNKEGFQLLVDWIWYLYGEGRILEAVDKRLGNEYEVEEAEKILKLGLACSHPIAGERPKMQSIVQIISGAGPVPYVPASKPAFIFPAVDFGSFISDLTTPSSTTVNTPLHTDSDPLHSNSSK 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g1199 712 CDD lectin_legume_LecRK_Arcelin_ConA 84 305 IPR001220 GO:0030246
Lele53g1199 712 MobiDBLite consensus disorder prediction 693 712 - -
Lele53g1199 712 ProSitePatterns Legume lectins beta-chain signature. 183 189 IPR019825 -
Lele53g1199 712 ProSiteProfiles Protein kinase domain profile. 382 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele53g1199 712 Pfam Legume lectin domain 67 315 IPR001220 GO:0030246
Lele53g1199 712 PANTHER - 94 660 - -
Lele53g1199 712 Gene3D - 63 324 - -
Lele53g1199 712 Gene3D Transferase(Phosphotransferase) domain 1 460 661 - -
Lele53g1199 712 MobiDBLite consensus disorder prediction 1 21 - -
Lele53g1199 712 SUPERFAMILY Concanavalin A-like lectins/glucanases 63 307 IPR013320 -
Lele53g1199 712 SMART serkin_6 382 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele53g1199 712 CDD STKc_IRAK 388 657 - -
Lele53g1199 712 SUPERFAMILY Protein kinase-like (PK-like) 363 656 IPR011009 -
Lele53g1199 712 ProSitePatterns Protein kinases ATP-binding region signature. 388 413 IPR017441 GO:0005524
Lele53g1199 712 Gene3D Phosphorylase Kinase; domain 1 367 459 - -
Lele53g1199 712 ProSitePatterns Serine/Threonine protein kinases active-site signature. 508 520 IPR008271 GO:0004672|GO:0006468
Lele53g1199 712 Pfam Protein tyrosine and serine/threonine kinase 385 655 IPR001245 GO:0004672|GO:0006468
Lele53g1199 712 FunFam probable L-type lectin-domain containing receptor kinase S.5 460 662 - -
Lele53g1199 712 FunFam probable L-type lectin-domain containing receptor kinase S.5 367 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g1199 Lele-ChrLele53 20774874 20778417 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g1199 53 664 Receptor kinase-like Gene Family AT3G53810 39.403 9.59e-128 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lele53g1199 PK_Tyr_Ser-Thr 8.9e-50 CL0016