Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g1196 ATGATTTTTTTATGCATCGCAAGCTTTTCTTGTCTTCTCCTTCTTGCTCCTCATCGTCATCATCGTGCGTGGGTGACACCAAATACACAGGTGCACCTAGAGCCACAACTGCGGACGTTTTCGGTGGCGCATTTCAACAAATCGAACCTCAGATATCGTCTTCTCTTTCTCTCTTCTCTCTCTGTGCCAATGGCGGCACTATGGGGATCGCTGGCCGCAGGGGGAGACATATCCAAGGCTCATATGGCTATGGTGATGGTTCAGCTTTTCAGTGGAGGATACCATGTCATCACCAAAGTAGCCCTCAATGTTGGAATCAATCAATTAGTGTTTTGTGTTTTCCGCGATCTCCTTGCACTTGCTATTCTTGCTCCCATCGCTTACATCCGGGAAAAACGGACACGACCACCCATTACTAAACACCTCCTGATATCATTCTTCTTTCTTGGATTAACAGGGATATTCGGCAACCATCTTTTGTTTCTTATTGGTTTAAGCTATACAAATCCAACTTATGCAGCTGCGATACAACCAGCCATTCCAGTCTTCACTTTTCTTTTGGCTGTAATGATGGGCACAGAAAGAGTGAATTTACTCAGATATGAAGGTCTGGCAAAAGTTGGAGGAACTCTTATCTGTGTTTGTGGGGCCATATTTATGGTTTTGTTTCGTGGTCCAGCATTGATAGGATATGCAGATTCGGACATTTTAGCACATAGCGAAATAACTGCAAGAGGTCAACCTGAGCCATATGGATGGTTAATTGGCGGTTTAATGGATCTTGGTTTAGATCATTTTCATCTTGGGGTTCTGTGCTTGATTGGAAACTGCTTGTGCATGGCTACTTGTCTGGCCATTCAGGCTCCACTATTGAAAAAGTATCCCGCAAACCTATCTGTCGCAGCATACTCTTACTTGTTTGGAGCTTTGCTAATGGTGATAACAGCATTCTTCATGACCAATGAGTCAACTGACTGGAGCTTGACGCCATCTGAAACATTTGCTGTTATTTATGCTGGAACCATTGCATCTGCCGTTAACTATGGACTCTTGACATGGAGCAACAAGATTTTGGGTCCGGCTATGGTTGCCCTTTATAACCCACTTCAACCTGCAGCATCCACCCTTCTGTCACGAATTTTCCTTGGAAGTCCTATTTTCTTGGGAAGTGTTCTTGGGGGATCTTTGATCATTGCTGGTCTATATGCGGTCACTTGGGCAACTTATAGAGAAAGACAAGCTGCACTTGGAGTTATTCCTCAGAGCTCCTGGGTCAACGACCAAATTATTCATACAGATGGATTAGTGAGCAAGAGTTCATTTCAGTTAGGTCACATTTTTTCAGGGTCACCCAAGTCTTCTGATTAA 1368 0.4393 MIFLCIASFSCLLLLAPHRHHRAWVTPNTQVHLEPQLRTFSVAHFNKSNLRYRLLFLSSLSVPMAALWGSLAAGGDISKAHMAMVMVQLFSGGYHVITKVALNVGINQLVFCVFRDLLALAILAPIAYIREKRTRPPITKHLLISFFFLGLTGIFGNHLLFLIGLSYTNPTYAAAIQPAIPVFTFLLAVMMGTERVNLLRYEGLAKVGGTLICVCGAIFMVLFRGPALIGYADSDILAHSEITARGQPEPYGWLIGGLMDLGLDHFHLGVLCLIGNCLCMATCLAIQAPLLKKYPANLSVAAYSYLFGALLMVITAFFMTNESTDWSLTPSETFAVIYAGTIASAVNYGLLTWSNKILGPAMVALYNPLQPAASTLLSRIFLGSPIFLGSVLGGSLIIAGLYAVTWATYRERQAALGVIPQSSWVNDQIIHTDGLVSKSSFQLGHIFSGSPKSSD 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g1196 455 SUPERFAMILY Multidrug resistance efflux transporter EmrE 115 223 - -
Lele53g1196 455 Pfam EamA-like transporter family 268 405 IPR000620 GO:0016020
Lele53g1196 455 Pfam EamA-like transporter family 81 219 IPR000620 GO:0016020
Lele53g1196 455 PANTHER WAT1-RELATED PROTEIN 80 412 IPR030184 GO:0016020|GO:0022857
Lele53g1196 455 SUPERFAMILY Multidrug resistance efflux transporter EmrE 305 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g1196 Lele-ChrLele53 20751739 20756484 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g1196 79 339 Nodulin-like Gene Family AT3G45870 70.881 1.22e-123 359