Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g1193 ATGCCACAAAACTTCATAGCTCCAAAACTCACTTTCTACCCCATAACTCTGAAGTTTGAGGAGGTAGTTTACAAAGTGAAACCAGATCATCATAAAGGAGTGTGTTGTTGGGGAAGTTCATCATGGAGTAGTAGTTGCAGAGAGAAGACGATATTGAATGGAATCTCAGGCATGGTATCTCCTGGTGAGATTCTGGCCATGTTGGGCCCTTCTGGCAGTGGCAAAACGACGCTTCTTACAGCTCTCGGAGGTCGTTTAACAAATGGCAGATTATCAGGCAAAATTACATACAACAACCAACCTTTCTCAGGTTCCATCAAGAGAACAACAGGTTTTGTGGCTCAGGACGATGTTCTCTATCCTCATCTCTCTGTTTCAGAAACTCTAATCTTCACCGCACTTCTCAGGCTTCCCAATAGCCTCACCAAGAACGACAAGATCAACCACGTTGAGAGAGTTATCACTGAACTTGGCCTTACACGTTGCAGAAACAGTATCATCGGAGGAGCATTGGTGAGAGGAATCTCAGGTGGAGAGAAGAAAAGAGTGAGTATAGCTCAAGAAATGCTCATAAATCCCAGCTTGTTGCTTCTTGATGAACCCACCTCCGGCTTGGACTCCACCACGGCTCAGAGGATATTGACCACCGTCAAGGCCGTCGCCACCGCCGGAAGGACGGTCGTCACCACCATTCACCAGCCGTCCAGCCGTCTGTATCATATGTTTGACAAGGTGGTGGTTCTATCAGAAGGACGAAGCATATATAATGGACCAGCTTCATCAGCCATGGAGTATTTCTCTTCTCTTGGATTCTCAACATCCATCACTCTCAATCCTGCCGACTTCTTGCTTGATCTTGCTAATGGGATTGCCCCTGACTCCAAGCATGCAAGTGAACAGAGTGAGAGCTTGGAACAAGAAAGGAAGCTAACCAGAGAAGCTCTCCTTTCTGCTTATGAAAACAACATTGCTCCTAAGTTGAAACATGAGATTGACAACTTCAACAACTTCACGAAACATGCTTCATCTAGAAATGTCATAACAAAAACAGAGCAATGGTGCACGAGCTGGTGGTATCAGTTCAAGGTGCTGTTACAGAGAGGGATAAGAGAAAGAAGATATGAAGCATTCAATAGATTAAGGATATTCCAGGTCATAAGTGTTGCTTTTCTTGGTGGACTCTTATGGTGGCATACACCAGAGTCTCACATTCAAGACAGGGTAGCTTTGCTGTTTTTCTTCTCTGTTTTCTGGGGATTCTACCCTCTGTACAATGCAGTTTTCACTTTCCCTCAAGAAAGAAGAATGCTCATCAAAGAGCGATCTTCAGGAATGTATCGTCTCTCTTCCTACTTTCTGGCAAGAACAATCGGAGATCTTCCATTAGAGCTCGCACTTCCAACTGTATTCGTGCTCATAATCTATTGGATGGGAGGCCTCAAGCCTGATCCAGTCACCTTCATTCTCTCACTTGTCGTGGTTCTTTACAGTGTTCTTGTGTCTCAGAGTCTAGGGTTAGCATTTGGAGCTATTCTAATGGAGGTTAAACAGGCCACAACCCTAGCTTCTGTAACAACGCTTGTGTTCCTCATTGCTGGAGGCTACTACGTACAACACATACCTCCATTCATAGTGTGGCTCAAGTACTTGAGTTATAGTTATTACTGTTACAGGCTGCTTCTGGGTGTTCAGTACGATGAAGATGATTATTATGAGTGCTCCAATAATGGGGTTTTGTGCAGAGTTGAAGATTTCCCTCCCATCAAATCGATGGGTTTGAATCATTTGTGGGTGGATGTGTTCATCATGGCTCTTATGTTGCTGGGTTATCGATTGCTTGCTTATTTAGCACTACACAGAGTGAGGTAG 1869 0.4446 MPQNFIAPKLTFYPITLKFEEVVYKVKPDHHKGVCCWGSSSWSSSCREKTILNGISGMVSPGEILAMLGPSGSGKTTLLTALGGRLTNGRLSGKITYNNQPFSGSIKRTTGFVAQDDVLYPHLSVSETLIFTALLRLPNSLTKNDKINHVERVITELGLTRCRNSIIGGALVRGISGGEKKRVSIAQEMLINPSLLLLDEPTSGLDSTTAQRILTTVKAVATAGRTVVTTIHQPSSRLYHMFDKVVVLSEGRSIYNGPASSAMEYFSSLGFSTSITLNPADFLLDLANGIAPDSKHASEQSESLEQERKLTREALLSAYENNIAPKLKHEIDNFNNFTKHASSRNVITKTEQWCTSWWYQFKVLLQRGIRERRYEAFNRLRIFQVISVAFLGGLLWWHTPESHIQDRVALLFFFSVFWGFYPLYNAVFTFPQERRMLIKERSSGMYRLSSYFLARTIGDLPLELALPTVFVLIIYWMGGLKPDPVTFILSLVVVLYSVLVSQSLGLAFGAILMEVKQATTLASVTTLVFLIAGGYYVQHIPPFIVWLKYLSYSYYCYRLLLGVQYDEDDYYECSNNGVLCRVEDFPPIKSMGLNHLWVDVFIMALMLLGYRLLAYLALHRVR 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g1193 622 Pfam ABC-2 type transporter 359 565 IPR013525 GO:0016020|GO:0140359
Lele53g1193 622 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 17 275 IPR003439 GO:0005524
Lele53g1193 622 ProSitePatterns ABC transporters family signature. 175 189 IPR017871 GO:0005524|GO:0016887
Lele53g1193 622 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 14 615 - -
Lele53g1193 622 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 45 268 IPR027417 -
Lele53g1193 622 Gene3D - 40 269 IPR027417 -
Lele53g1193 622 FunFam ABC transporter G family member 22 40 269 - -
Lele53g1193 622 CDD ABCG_EPDR 14 257 - -
Lele53g1193 622 Pfam ABC transporter 52 203 IPR003439 GO:0005524
Lele53g1193 622 SMART AAA_5 61 252 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g1193 Lele-ChrLele53 20726165 20728305 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g1193 51 260 Calmodulin-binding Proteins AT2G36910 24.424 2.20e-08 55.5