Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g1184 ATGACCATACAGACTGGCATTCCCGCCATTTCGTGCCTCGGTCTATCATTTGGCGCTTCGGCTGTGAACAGTGAGGCAGCTGAAACTCTCTCTGGCAAGAGGTGGCTTCACGGTTTGACAGCGAATATGCAAGTTGTTCGATCTCACGTCCATCGGAGTATCTCCACTAATGAAGCTGTTAACACCCTTCCACTCTATCGTTCTGCACCACCGCTTGAAGTCAGGCTCGAGGATTTCGAGCTATACGCTATGGATCGTCTTCGAGTTCTCAAGGGGATTTCAGATGGCTTATCTCGGGGAAAGAAACCAGAGGAAATGGATCAATTAGTAAACAATCTATGGAAAGCACATATGAGGCATCAACAGGCATCTGAAGTTGTAAATAAGGATATTATATCTCATTTTGTTCTTCGGCTTGTGTATTGCCGAACTGAGGACTTGAGGAAATGGTTCTTATCTATGGAAACTTCACTATTTCGCTACCGGTTTCGTCTTGAAAATGCTGAAGCTCAGAGGGCAATCATGGCAGAATTTGAGCTTCCTTACAAGGCTGTTAGCCATGTAGAATTTGAGAGCGTGAAGGACAAATTGGAACAAGTTGCACGGTCCATTGGCCTACCTCCACGTGACAATGACGCTATATTCTACAAGGTACCATTTGAAGAAGTTCCAGAGCTTGTGGCTGGTCGGAAAGTATTTATAAATCAAGGTTATGCTTATGTTGGAATGAATCAGGTTGTCTCATTGGTAGCCACACTATTCCGGAGTCAGCTATCCAAGGCACTCATACTCACAAACAGAAAATGGACATCTACAGTTAGAGAACAAGAAAAAGATAGATTGGCTCCTATTGTGGAAGCACTGTGCTCAAGTTATCTAGGTCCTGACTATTCTCAGCCTAGAGAGTATGCTCAGATATCATTAAAGGACATTGATCAAGTTGCTAAGAGCTCATTTCCATTGTGCATGCGTCATCTATTTGAAAAGTTGAGAGAGGATCACCATTTAAAGCATGGAGGGAGGATGCAACTAGGTCTCTTTCTGAAGGGTGTTGGTTTGAATCTGGATGAGGCACTTGCATTTTGGAGACATGAATTCTCTCAAAAGGTTGGTCTGGAGAGGTTTGAGAAAGAGTATGCATATAGCATACGCCATAATTATGGAAAGGAAGGGAAGAGAACTGACTATAGTCCCTATTCTTGTCAAAAGGTTATTTCATCAACTCCTGGTGTTGGAGATCATCATGGATGCCCCTATAGACACTTCAGTGAGGAGAATCTTAGAGCTGCTCTTAACAGAATGGGGGTGAATGGTCGAGCAATTGAAGACGTAATGGACAAAGTACGAAATAGACATTATCAGCTGGCTTGCACCCTGACATTTGAAGCTATTCATGGCAAGCAATGTGATGCGGGGATTAACCATCCAAATCAATACTTCAGTGACAGCCAAAAGATATTGAAGCCTAAGGTTTATGGGGACGCAAGAACCTCAGAGCGCGTCCTGATTTTCAAGATCCACGGCTTTCCTGACTTGAGGCGTTGA 1545 0.4369 MTIQTGIPAISCLGLSFGASAVNSEAAETLSGKRWLHGLTANMQVVRSHVHRSISTNEAVNTLPLYRSAPPLEVRLEDFELYAMDRLRVLKGISDGLSRGKKPEEMDQLVNNLWKAHMRHQQASEVVNKDIISHFVLRLVYCRTEDLRKWFLSMETSLFRYRFRLENAEAQRAIMAEFELPYKAVSHVEFESVKDKLEQVARSIGLPPRDNDAIFYKVPFEEVPELVAGRKVFINQGYAYVGMNQVVSLVATLFRSQLSKALILTNRKWTSTVREQEKDRLAPIVEALCSSYLGPDYSQPREYAQISLKDIDQVAKSSFPLCMRHLFEKLREDHHLKHGGRMQLGLFLKGVGLNLDEALAFWRHEFSQKVGLERFEKEYAYSIRHNYGKEGKRTDYSPYSCQKVISSTPGVGDHHGCPYRHFSEENLRAALNRMGVNGRAIEDVMDKVRNRHYQLACTLTFEAIHGKQCDAGINHPNQYFSDSQKILKPKVYGDARTSERVLIFKIHGFPDLRR 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g1184 514 CDD PriL_PriS_Eukaryotic 65 483 IPR016558 -
Lele53g1184 514 Gene3D - 36 288 - -
Lele53g1184 514 PIRSF DNA_primase_large 35 500 IPR016558 -
Lele53g1184 514 FunFam DNA primase large subunit 47 288 - -
Lele53g1184 514 Pfam Eukaryotic and archaeal DNA primase, large subunit 215 480 IPR007238 GO:0006269
Lele53g1184 514 PANTHER DNA PRIMASE LARGE SUBUNIT 58 490 IPR007238 GO:0006269
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g1184 Lele-ChrLele53 20659927 20666705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g1184 43 491 Core DNA Replication Machinery Family AT1G67320 66.940 0.0 680