Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g1180 ATGAATAGCATCAACAACGACAGTTCCAGACAAGATCTCGACCCTCAAAGTGACCACAGTTCCGACTATTTAGCTCACTCTCTTCCTCTCCAGCCCCAGCCTCAGCCTCGCCGCCCTCGTGGCTTTGCGGCCACGGCGGCGGCAGCTACTACCGCCCCCAATTTCGCTGGAAAGGGAAAGAAAGAGAGAGAGAAAGAGAAGGAGCGAACCAAGCTCCGAGAGCGTCACCGTCGAGCAATCACTAGCCGTATGCTAGCTGGCCTCCGTCAGTATGGTAGCTTCCCTCTCCCGGCTCGTGCGGACATGAATGATGTGCTTGCCGCGCTCGCCCGCGAGGCTGGTTGGGTTGTTGAGGCAGATGGCACCACCTACCGTCAGTGCCAGCCTCCTTCGCAAATGGCATCATTTGCTGCAAGGACAGTTGAAACTCCACTCTCTGCTGGTTCTTTAAGAGCTTGCGCTGCCAAAGAAACACTAGTGAATCGACCACCAGTACTTAGACTTGATGAAAGCTTGTCACCGTCATCCATTGATTCTGTTGTAATTGCAGAGAGGGATTCAAAGAATGAGAAATATCCAAGTGCAAGCCCTATCAATCCAGTCGACTGCTTGGAGGCTGATCAGGATATTCATTCTGGGGAGCATGAGAATGATTTCGCGGGCACACCTTATGTTCCTGTTTATGTAAAGCTTCCAGCTGGTATTATTAACAAATTTTGCCAGTTGGTTGATCCTGAAGGAATTAGAAAGGAGCTAATTCACATGAAATCTTTAAATTTTGATGGTGTCATTGTGGATTGTTGGTGGGGCATTGTTGAAGGTTGGAGCCCACAGGAATATGTGTGGTCTGGCTATAGGGAACTTTTTGACATTGTTAGAGAAATCAACTTTAAGTTACAGGTCGTTATGGCTTTTCATGAATATGGAGGGAATGATTGTAGTGATCCATTGATTGCCCTCCCACAATGGATTTTGGAGATTGGAAAAGACAACCAGGATATTTTTTTCACAGATCGTGAAGGACGGAGAAATACTGAATGTCTTTCTTGGGGCATTGACAAAGAGAGAGTTCTGAAAGGAAGAACTGGAATCGAGGTCTATTTTGATTTCATGAGAAGCTTTCGGACAGAGTTTAATGACTTGTTTGCGAAAGGCCTCATCTCTGCTGTAGAAATTGGACTTGGGGCATCTGGGGAGCTGAAATATCCTTCTTTTTCGGAAAGGATGGGATGGAGGTACCCTGGTACTGGTGAGTTTCAGTGTTATGATAAATATCTGCTACAAAGTCTACGAAGAGCAGCCAAATCACGTGGCCACTCTTTTTGGGCTAGAGGACCTGATAATGCTGGACAATACAATTCTGTGCCACATGAAACTGGATTCTTTTGTGAACGGGGTGATTATGACAATTATTATGGCCGCTTCTTCTTGCATTGGTATGCCCAGTCGTTAATAGACCATGCAGATAATGTTTTGTCTCTTGCAAGCCTGGCTTTTGAGGAAACAAGACTAATTGTCAAGGTTCCTGCTGTATACTGGTGGTACAAGACTACTAGTCATGCAGCAGAGTTGACAGCAGGATATCACAACCCTACAAACCTGGATGGATACTCTCCTGTTTTTGAGGTTCTGAAAAAACATGGTGTGACCATGAAGTTTGTCTGCTTAGGATTTCAGCTTTCTAGTCAGGAAACGGACGAGTCATTGGCTGACCCCGAGGGCTTGACTTGGCAGGTATTGAACTCATCCTGGGATCGAGGGTTGATAGTAGCTGGAGAGAATGCGATACCATGTTATGAGAGAGAAGGCTTCAAGAGGCTAGTTGATATAGCGAAGCCAAGAAATGATCCTGATCGCCACCACTTTTCATTTTTTGCATATCAACAACCTTCCATGGTTCAGGGGAATATTTGCTTACCAGATTTGGATCACTTCATCAAATGCATGCATGGTGACATTACGGGGGATCTGTAA 1974 0.459 MNSINNDSSRQDLDPQSDHSSDYLAHSLPLQPQPQPRRPRGFAATAAAATTAPNFAGKGKKEREKEKERTKLRERHRRAITSRMLAGLRQYGSFPLPARADMNDVLAALAREAGWVVEADGTTYRQCQPPSQMASFAARTVETPLSAGSLRACAAKETLVNRPPVLRLDESLSPSSIDSVVIAERDSKNEKYPSASPINPVDCLEADQDIHSGEHENDFAGTPYVPVYVKLPAGIINKFCQLVDPEGIRKELIHMKSLNFDGVIVDCWWGIVEGWSPQEYVWSGYRELFDIVREINFKLQVVMAFHEYGGNDCSDPLIALPQWILEIGKDNQDIFFTDREGRRNTECLSWGIDKERVLKGRTGIEVYFDFMRSFRTEFNDLFAKGLISAVEIGLGASGELKYPSFSERMGWRYPGTGEFQCYDKYLLQSLRRAAKSRGHSFWARGPDNAGQYNSVPHETGFFCERGDYDNYYGRFFLHWYAQSLIDHADNVLSLASLAFEETRLIVKVPAVYWWYKTTSHAAELTAGYHNPTNLDGYSPVFEVLKKHGVTMKFVCLGFQLSSQETDESLADPEGLTWQVLNSSWDRGLIVAGENAIPCYEREGFKRLVDIAKPRNDPDRHHFSFFAYQQPSMVQGNICLPDLDHFIKCMHGDITGDL 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g1180 657 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 280 298 IPR001554 GO:0000272|GO:0016161
Lele53g1180 657 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 575 597 IPR001554 GO:0000272|GO:0016161
Lele53g1180 657 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 519 530 IPR001554 GO:0000272|GO:0016161
Lele53g1180 657 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 302 323 IPR001554 GO:0000272|GO:0016161
Lele53g1180 657 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 468 487 IPR001554 GO:0000272|GO:0016161
Lele53g1180 657 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 537 560 IPR001554 GO:0000272|GO:0016161
Lele53g1180 657 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 502 518 IPR001554 GO:0000272|GO:0016161
Lele53g1180 657 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 395 417 IPR001554 GO:0000272|GO:0016161
Lele53g1180 657 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 259 273 IPR001554 GO:0000272|GO:0016161
Lele53g1180 657 SUPERFAMILY (Trans)glycosidases 219 653 IPR017853 -
Lele53g1180 657 Gene3D Glycosidases 215 655 - -
Lele53g1180 657 MobiDBLite consensus disorder prediction 1 71 - -
Lele53g1180 657 Pfam Glycosyl hydrolase family 14 241 628 IPR001554 GO:0000272|GO:0016161
Lele53g1180 657 Pfam BES1/BZR1 plant transcription factor, N-terminal 57 203 IPR008540 -
Lele53g1180 657 MobiDBLite consensus disorder prediction 57 71 - -
Lele53g1180 657 PANTHER BETA-AMYLASE 1, CHLOROPLASTIC 165 651 IPR001554 GO:0000272|GO:0016161
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g1180 Lele-ChrLele53 20643094 20648077 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g1180 33 653 Glycoside Hydrolase AT5G45300 68.000 0.0 881
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Lele53g1180 Glyco_hydro_14 1e-84 CL0058