Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g1170 ATGTATACAGCGATTCTTTCTCGAACCACAAACCGAGAAAACGCGTTGGTATGTCTGAGAGGTTCAAGCAATCACCAAATCGAAATACTGCCTCAACGCTCTCTGCAAGTGCGAACCCTAATTCCAGCTTCTCTCCTAGATTCATACGACGTCTTTACGATGTTCGGAGGCGGAGAAGACGAGGCCTTTGCCCGCTTGGGCATCATGGCGCCGTCCCTCCTCAAACCGGCCACGTCGTCGGTGATTTCCGGTGAGATGTCACCGTCGACGGCAGCTGCGCCTGTGAGGGACGAGAGGGTTCCAGCGCAGCCGCAGTGGAGCCAGCAGGAGACGAGGGAGTTCATAGCGATACGCGCGGAGCTGGAACGGGACTTCACTGCGTCTAAGCGAAATAAGACCCTCTGGGAGGTTGTCAGTAACAAGATGAGGGAGAGAGGCTTCGGGAGGAGTCCTGAACAGTGTAAATGCAAGTGGAAAAACCTTGTTAATCGTTATAAGGGGAAAGAGACATCAGATCCTGAGCATGGTAGACAGTGTCCCTTTTTTGAAGAATTACATGCCATCTTTGCTCAAAGAGCACAGAACATGCAGCGGTTACTTCTTGAATCTGAGGCCCGTTCAACACAGACAAAGAAGGGGATGAAAATGCTGAGCGGGGATCGGTCCTCAGAGGAATTCTCAGAAGATGATGATGAGATTGAAGATGACAGTGAAGAGGAAAGACCTGCAAGAAGCAACTCTCGCAAAAGGAAAGCAGACAAGGTTGCAATGGAGAAGTCTTCGAAGGCAAGTAATGCATCAGATGCTATCAATAATACTGCCAATAGCATTCAGGAAATGCTCAAGGAATTTTTCCAGCAGCAGCTGAGGATGGAGATGCAGTGGAGGGAGATGATGGAAAGGCGTTCTCATGAAAGACAGCTGTTTGAGCAGGAATGGAGGCAGTCAATGGAGAAGCTTGAGAGGGAGAGATTGATGATTGAGCAGGCATGGAGGGAGAGAGAAGAGCAGAGAAGAACAAGAGAAGAGAGCCGAGCAGAGAGGAGAGATGTACTGTTGACGACCCTTTTGAACAAGCTCATCCATGAATCTAATTAG 1098 0.4945 MYTAILSRTTNRENALVCLRGSSNHQIEILPQRSLQVRTLIPASLLDSYDVFTMFGGGEDEAFARLGIMAPSLLKPATSSVISGEMSPSTAAAPVRDERVPAQPQWSQQETREFIAIRAELERDFTASKRNKTLWEVVSNKMRERGFGRSPEQCKCKWKNLVNRYKGKETSDPEHGRQCPFFEELHAIFAQRAQNMQRLLLESEARSTQTKKGMKMLSGDRSSEEFSEDDDEIEDDSEEERPARSNSRKRKADKVAMEKSSKASNASDAINNTANSIQEMLKEFFQQQLRMEMQWREMMERRSHERQLFEQEWRQSMEKLERERLMIEQAWREREEQRRTREESRAERRDVLLTTLLNKLIHESN 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g1170 365 ProSiteProfiles Myb-like domain profile. 106 162 IPR001005 -
Lele53g1170 365 Coils Coil 310 330 - -
Lele53g1170 365 Pfam Myb/SANT-like DNA-binding domain 104 188 IPR044822 -
Lele53g1170 365 CDD GT1 104 169 - -
Lele53g1170 365 FunFam Zinc finger and SCAN domain-containing 20 106 167 - -
Lele53g1170 365 MobiDBLite consensus disorder prediction 239 258 - -
Lele53g1170 365 Gene3D - 106 167 - -
Lele53g1170 365 PANTHER FI21293P1 98 362 - -
Lele53g1170 365 MobiDBLite consensus disorder prediction 85 105 - -
Lele53g1170 365 MobiDBLite consensus disorder prediction 205 270 - -
Lele53g1170 365 SMART sant 102 164 IPR001005 -
Lele53g1170 365 MobiDBLite consensus disorder prediction 224 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g1170 Lele-ChrLele53 20599514 20601315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g1170 87 365 Trihelix Transcription Factor Family AT2G38250 42.857 3.24e-48 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele53g1170 Myb_DNA-bind_4 2e-22 CL0123