Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g1165 ATGTCACTTCTCAGCAGATTCTTTTACAGGAGACCCCCTGATGGTTTGCTGGAATTCGTCGATAGAGTATACGTTTTTGATTCCTGCTTTTCCACGGAGGCATTGCCTGATGGAATGTACCAAATATATTTACATGAAATCATTACCGAGTTACATGAAGAATTCCCGGACTCTTCCTTTTTCGCTTTCAATTTTCGTGAAGGGGAGAAACGTAGTCAATTTGCTGAAATTCTTTGTGAATACGATGTTACTGTGATGGATTATCCGCGGCAGTATGAGGGTTGCCCTATTCTTCCAGTGTCTTTGGTTCAACATTTTCTTCGGGTTTGTGAGAGTTGGCTTTCACTTGGAAATCAACAGAATGTTATCCTTCTCCACGGTGAGAGAGGAAGTTGGCCTCTCTTGGGGTTTCTTTTAGCTAGCTTTCTAATTTATAGAAGACTACACAGCGGCGAACGGAAGACACTTGAAATGGTGCATAGAGAGGCACCCAAAGGTTTCTTACAGCTATTGTCGCCTTTGAACCCGTTGCCATCTCAACTTCGTTATGTTCAGTATGTAGCAAGAAGGAACATAGCTCCTGAGTGGCCGCCGCCTGAGAGAGCTCTGTCTCTAGATTGTGTCATTCTCAGAGCCATTCCTAGTTTTGATTCCCAGAACGGATGCAGACCGATGATCCGCATTTTTGGTAGAAATTTTCTCAGCAAGGGTGGGCTTTCTACTCAGATGCTCTACTCCATGCACAAGAAAAAGAAAACCTTAAGGCACTACAGTCAGGTAGACTGTGATGTGATCAAGATTGACATACTATGTTTAGTACAAGGAGATGTGGTATTGGAGTGTGTCCATTTGGACATGGATCCAGAAAGGGAAGTAATGATGTTTCGCGTAATGTTCAACACGGCATTTATTCGGTCCAACATATTGATGCTGAATACTGAAAACCTGGACATTCTCTGGGACTCAAAGGAGCGGTATCCAAAAGGTTTCCGAGCTGAGGTTTTGTTTGGGGAGGTTGAAAGCATATCTCCTCCAAAGGCCCCAACAACTGTGTTAAATGGCGAGGAGAAGGGTGGATTGCCCATTGAAGCTTTTTCAAGGGTTCAAGAACTTTTTAGTGGAGTGGAGTGGCTTGACAGTGGTCAAGACGCTGCAGTCTGGTTGCTTAAACAGCTTTCTGTGTTAAATGATGTCAAAGAGCTTTCAAGGTTGCAAGGTAAAGCAAGTTGGTACTCATCACCCGCTGACTCTGAAGATGAAAATAATGAATCAAGCACTGCTGATAGTTCGGATGAAGCCTTTGATGTTATTCCAAAGTCTTCTACTTATATTTCCAAGTTATTGGAACCTGACAACCCTGATTCAGTCCATTTAGATTTTGAAAGTGATGGTAGAAATAGTGTACAACTTTCTTCAGAACCTCCAGATCCATCGATTGAAAGTGTTCCACTGTCTCATCATGCTCTTAGTAATGAATATCCTCACAATTCATCTCCACCCTCACCACCAGCAGCACCTTCTTCACTTTGTCCACCTCTTTCTAATGTCAGTGGAGATCCTTGCACATCTCCTATAGCATCGTCAGCAAATAGCAAGAGCCCAATACCATCCCCTCCGCCTCCTCCTCTACCATCAAACATTTCAACTTCATCTAATACTAAGCCTCTTCAAGTGGCAAGACCTCCACCACCACCACCACCTCCTCCCTCCCCTCCCACTCTAGCTCATAATGCTCCTAGACCCCCTCCACCACCACCTCCTATAGCAAAGCCTCTAAATCCTCCTCTTCCACCACCCTCGCCTAGTCAAGGCACAATACCATCTCCACCTCCACCTCCTCCACCACCACCTAATCGAGGTGCAATACCGCCTCCACCTCTACCTCCACTTCCTACAGATGGGCGAGATGCAATGCCGCCTCCACCTCCACCTCCACCTCCGCCTCTTCCACTACCACCTAATCAAGGTACAATACCACCTCCACCTCCACCTCTGCCTCCACCGCCGCCTTTACCACCTGGTCGAGATTCAATACTACCTCCACCTCTGCCACCTGGTCGAGGTGTTACACCACCTCCACCTCCTCCGCCACCACCTGGCCGAGGTGCAATGCCGCCAACACCTAGTCGTGACACAAAGCTGCCTCCGCCTCCACTGTCGCCTAGTCAAGGTGCAGCACCTCCTCCAATGCCACCTGGTCGGGGTGTAACACCGCCTCCGCCTCCACCACCACCACTTAGTCAAGGTGCAGCACTGCCTCCACCTCCACCTCCACCACCACCACCACCACTTGGTCAGGGTGCAGCACCTCCTCCACCTCCACCACCTAGTCAGGTTGCAGCACCTCCCCCACCTCCACCACCTGGTCGAGGTGCGACACCACCTCCGCCTCCGCCACCTGGTCGGGGTGCACCACCACCTCCTCCCCCTCTTGTTTCTAGGGGATCTGGTGTGCCGCCGCCACCCCTATCCATTGCCAAAGGTAAACCTTTAGCATCAACAAATATTGGAAGAGGTCGAGGTTCTAGTGGCACTGCTAATGCCCCTAAGAAAGCTTCATTAAAGCCCCTACATTGGGTGAAAGTTAGTAGAGCAATGCAAGGGAGTCTATGGGCTGATTCGTCGAAACAAGATAATCAATCAAGGCCCCCTGAAATTGATATATCAGAACTTGAGACTCTGTTTTCAGCAGCATCTGCTTCTGATGCGAGCAATGCTAAAGGTGTAGGTCGGCGTGGTTCTAATATCAATAAACCTGAGAAAGTTCAATTGATTGACTTGCGAAGAGCATATAATTGTGAAATAATGCTCTCTAAAATCAAAATTCCCTTGCCAGACATGCTTAACGCAGTTCTGGCTTTGGATTCTTCTACTTTAGACATTGATCAGGTTGAGAATCTTATCAAGTTCTGTCCTACAAAGGAAGAAATGGAAATGTTGAAGAATTACACTGGGAACAAGGAAATGCTTGGAAAGTGTGAACAGTTTTTCATGGAGTTGATGAAGGTTCCACGAGTTGAAGCTAAATTACGAGTTTTTGCTTTTAAAATCACCTTTTCTAGTCAGGTGAATGATTTGAGAGTAAATTTGAACACAATCAATGATGCCGCGAGGGAGGTGAAAGAATCTATGAAGTTGCGTCAAATAATGCAGACTATTCTTACTTTGGGCAATGCCTTGAATCAGGGAACAGCACGAGGATCTGCAGTAGGATTCAAATTAGATAGCCTTCTTAAATTGTCTGATACTCGGGCAAGGAATAACAAAATGACTTTGATGCATTATTTGTGTAAGCTTCTTTCTGAGAAAATGCCAGAATTGGTAGATTTTGGCAAGGATCTCGTCCATTTGGAAGCAGCTTCAAAGATCCAACTAAAAGCATTGGCTGAAGAGATGCAAGCGGTTAGCAAAGGTCTGGAAAAAGTTGAGCAAGAACTTACAGCTTCAGAAAATGATGGTGTTATATCTGCAGGCTTCCGTAAGGTGCTGAAGAATTTTCTTGATATTGCTGAAGCTGAAGTGAGGTCACTCATATCATTGTATTCTGAAGTGGGAAGAAATGCAGATTCTTTGTCCCAGTACTTTGGGGAGGATCCCGCTCGGTGCCCCTTTGAGCAAGTGACTCAAATCCTGGTTGTCTTTGTCAAGATGTTCAACAAATCAAGGGAGGAGAATGAAAGGCAGGCAGACGCCGAAAAGAAGAAATTGGAGAGAGAAGCCATGAAGGAACAGCGAACACCTGTAAATACAAATTTGAAAAAAGATGTTCACTAG 3774 0.4608 MSLLSRFFYRRPPDGLLEFVDRVYVFDSCFSTEALPDGMYQIYLHEIITELHEEFPDSSFFAFNFREGEKRSQFAEILCEYDVTVMDYPRQYEGCPILPVSLVQHFLRVCESWLSLGNQQNVILLHGERGSWPLLGFLLASFLIYRRLHSGERKTLEMVHREAPKGFLQLLSPLNPLPSQLRYVQYVARRNIAPEWPPPERALSLDCVILRAIPSFDSQNGCRPMIRIFGRNFLSKGGLSTQMLYSMHKKKKTLRHYSQVDCDVIKIDILCLVQGDVVLECVHLDMDPEREVMMFRVMFNTAFIRSNILMLNTENLDILWDSKERYPKGFRAEVLFGEVESISPPKAPTTVLNGEEKGGLPIEAFSRVQELFSGVEWLDSGQDAAVWLLKQLSVLNDVKELSRLQGKASWYSSPADSEDENNESSTADSSDEAFDVIPKSSTYISKLLEPDNPDSVHLDFESDGRNSVQLSSEPPDPSIESVPLSHHALSNEYPHNSSPPSPPAAPSSLCPPLSNVSGDPCTSPIASSANSKSPIPSPPPPPLPSNISTSSNTKPLQVARPPPPPPPPPSPPTLAHNAPRPPPPPPPIAKPLNPPLPPPSPSQGTIPSPPPPPPPPPNRGAIPPPPLPPLPTDGRDAMPPPPPPPPPPLPLPPNQGTIPPPPPPLPPPPPLPPGRDSILPPPLPPGRGVTPPPPPPPPPGRGAMPPTPSRDTKLPPPPLSPSQGAAPPPMPPGRGVTPPPPPPPPLSQGAALPPPPPPPPPPPLGQGAAPPPPPPPSQVAAPPPPPPPGRGATPPPPPPPGRGAPPPPPPLVSRGSGVPPPPLSIAKGKPLASTNIGRGRGSSGTANAPKKASLKPLHWVKVSRAMQGSLWADSSKQDNQSRPPEIDISELETLFSAASASDASNAKGVGRRGSNINKPEKVQLIDLRRAYNCEIMLSKIKIPLPDMLNAVLALDSSTLDIDQVENLIKFCPTKEEMEMLKNYTGNKEMLGKCEQFFMELMKVPRVEAKLRVFAFKITFSSQVNDLRVNLNTINDAAREVKESMKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCKLLSEKMPELVDFGKDLVHLEAASKIQLKALAEEMQAVSKGLEKVEQELTASENDGVISAGFRKVLKNFLDIAEAEVRSLISLYSEVGRNADSLSQYFGEDPARCPFEQVTQILVVFVKMFNKSREENERQADAEKKKLEREAMKEQRTPVNTNLKKDVH 1257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g1165 1257 MobiDBLite consensus disorder prediction 462 478 - -
Lele53g1165 1257 PANTHER FORMIN-J 757 1245 - -
Lele53g1165 1257 MobiDBLite consensus disorder prediction 448 852 - -
Lele53g1165 1257 Gene3D Formin, FH2 domain 844 1230 IPR042201 -
Lele53g1165 1257 Coils Coil 1219 1246 - -
Lele53g1165 1257 SMART PTEN_C2_2 198 338 IPR014020 -
Lele53g1165 1257 SMART it6_source 469 1255 IPR015425 -
Lele53g1165 1257 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Lele53g1165 1257 MobiDBLite consensus disorder prediction 409 434 - -
Lele53g1165 1257 MobiDBLite consensus disorder prediction 557 817 - -
Lele53g1165 1257 MobiDBLite consensus disorder prediction 510 532 - -
Lele53g1165 1257 MobiDBLite consensus disorder prediction 1224 1257 - -
Lele53g1165 1257 SUPERFAMILY Formin homology 2 domain (FH2 domain) 919 1245 - -
Lele53g1165 1257 Gene3D - 197 342 - -
Lele53g1165 1257 Coils Coil 1125 1152 - -
Lele53g1165 1257 Pfam C2 domain of PTEN tumour-suppressor protein 199 337 IPR014020 -
Lele53g1165 1257 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 339 IPR035892 -
Lele53g1165 1257 Pfam Formin Homology 2 Domain 848 1219 IPR015425 -
Lele53g1165 1257 FunFam Formin-like protein 843 1230 - -
Lele53g1165 1257 ProSiteProfiles Formin homology-2 (FH2) domain profile. 844 1244 IPR015425 -
Lele53g1165 1257 Gene3D Protein tyrosine phosphatase superfamily 16 191 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g1165 Lele-ChrLele53 20564056 20571855 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g1165 801 1228 FH2 protein (formin) Gene Family AT1G31810 77.336 0.0 663