Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g1161 ATGAAGGTCAGAGCTGGGAGAGGATTTTCCCTTGAAGAGCTCAAGGCTGCTGGTATTCCCAAAAAGCTGGCCCCAACCATTGGCATTTCTGTTGATCACCGCCGCAGGAACCGATCTCTGGAAAGTCTTCAAGCTAATGTCCAGAGGCTGAAAACATACAAGGCCAAGCTTGTTGTGTTCCCAAGACGTGCACGTAAGGTCAAGGCTGGTGATTCCACACCCGAGGAGCTGGCCAATGCCACACAAGTCCAGGGTTCATTCATGCCTATTGTGAGGGAGAAGCCATCAGTGGAGCTTGTTAAGGTTACTGATGATATGAAGGCATTTAAAGCTTATGAGAAGCTTCGCCTTGAACGCACTAACAAGAGACACGTTGGTGCCAGACTGAAGAGGGCTGCTGAAGCAGAGAAGGATGAAAAGAAGTGA 426 0.493 MKVRAGRGFSLEELKAAGIPKKLAPTIGISVDHRRRNRSLESLQANVQRLKTYKAKLVVFPRRARKVKAGDSTPEELANATQVQGSFMPIVREKPSVELVKVTDDMKAFKAYEKLRLERTNKRHVGARLKRAAEAEKDEKK 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g1161 141 FunFam 60S ribosomal protein L13 100 141 - -
Lele53g1161 141 Hamap 50S ribosomal protein L13e [rpl13e]. 1 62 IPR001380 GO:0003735|GO:0005840|GO:0006412
Lele53g1161 141 Pfam Ribosomal protein L13e 1 119 IPR001380 GO:0003735|GO:0005840|GO:0006412
Lele53g1161 141 ProSitePatterns Ribosomal protein L13e signature. 4 18 IPR018256 GO:0003735|GO:0005840|GO:0006412
Lele53g1161 141 Gene3D - 101 141 - -
Lele53g1161 141 PANTHER 60S RIBOSOMAL PROTEIN L13 1 140 IPR001380 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g1161 Lele-ChrLele53 20532308 20533005 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g1161 1 126 Cytoplasmic Ribosomal Protein Gene Family AT3G49010 82.540 1.88e-76 224