Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g1159 ATGATGATGACGTCAGGTGGTCGAGAGTTCTATGCATATGGAAATCGCATGAATACTGAAGAAGTTGAAGCCAAACTTGACCAAGGAGATGTTGAAGCAGCTGAATCTGCATTGAAAGAGGGCTTATCTATCACTTCTGAGGAAGCAAGAAGTCTCATCGGGAAGCTTGAGTATCAAAGAGGGAATTATGCAAGTGCTCTTCGTGTGTTTGATGGGGTTGATCTCCAAGCTGCCCTTCAGCAATTGCAATCTTTAGTTTCTGACAAATCAGCGGCCAAGAAAGCACGCGAGGCACCTAACTCAGTCCCTAGGCATGCTGCTGGTTTGATGCTTGAATCCATCTACTTCAAAGCAAAAACTCTTCGAAAGCAGGGGAAAATAGCCGAACACAGAAATTTGACAAATTCTTTGCGCTATGCGAAGCAGTTCTTTGATGAAACAGGAGGATCTATATTGAAAGGTTGGAGATTGATTGCTCAGGTTCAAGATGATGTGAAGGAAATTGATGTTTGGCATGGGCTGGCATACTTATATGCAAGCCTTTCTCATTGGAAGGATGCTGAAGTTTGTTTGCAAAAGGCCAGAGAATTGAAGGAGTTCTCAGCAGAAACAGCGCACATTGAAGGCAAGAACAAAACCTTAAGTTAA 648 0.4306 MMMTSGGREFYAYGNRMNTEEVEAKLDQGDVEAAESALKEGLSITSEEARSLIGKLEYQRGNYASALRVFDGVDLQAALQQLQSLVSDKSAAKKAREAPNSVPRHAAGLMLESIYFKAKTLRKQGKIAEHRNLTNSLRYAKQFFDETGGSILKGWRLIAQVQDDVKEIDVWHGLAYLYASLSHWKDAEVCLQKARELKEFSAETAHIEGKNKTLS 215
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele53g1159 215 PANTHER PROTEIN NPG1 162 210 IPR043376 -
Lele53g1159 215 Gene3D Tetratricopeptide repeat domain 10 203 IPR011990 GO:0005515
Lele53g1159 215 SUPERFAMILY TPR-like 25 199 IPR011990 GO:0005515
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele53g1159 Lele-ChrLele53 20517916 20520640 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g1159 156 210 Calmodulin-binding Proteins AT2G43040 60.714 1.71e-17 78.6