Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g1154 ATGGAGAGGTACAAGTTAATCAAGGAAGTCGGTGATGGAACATTTGGGAGTGTTTGGAGAGCTCTTAATAAGCAAAATGGTGAAGTTGTTGCTATCAAGAAGATGAAGAAGAAATATTACTCTTGGGAGGAGTGTGTAAACCTGAGAGAAGTCAAATCATTACGGAGAATGAATCATCCAAATATTGTCAAGCTAAAGGAAGTTATTCGAGAAAATGACATTCTGTACTTTGTTTTTGAGTACATGGAATGCAATTTGTACCAACTCATGAAAGACAGGGAAAATGTGTTTTCTGAAAGTGAAGTTAGAAATTGGTGTTTTCAAGTTTTCCAAGGTCTTGCATACATGCACCAACGTGGATACTTCCATCGTGACCTGAAGCCAGAAAATTTGCTTGTTTCCAAGGATATCATAAAGATTGCTGATTTTGGTCTTGCCCGTGAGATCAGTTCGCAACCGCCCTACACTGAATATGTCTCCACTCGGTGGTATCGTGCACCTGAAGTGCTGCTTCAGTCTTACTTGTATACCTCAAAAGTTGACATGTGGGCAATGGGTGCTATAATGGCTGAACTGTTCACACTCCGTCCTCTTTTTCCGGGTGCCAATGAGGCAGATGAGATCTACAAAATATGTGGTGTGATAGGCAGTCCAACCGTTGAATCCTGGGCTGAAGGACTTAAACTAGCAAGGGATATTAACTATCAGTTCCCACAGCTTCCTGGTGTACATCTTTCTACCCTGATCCCATCTGTTAGTGTTAATGCAATCAGCCTTATTACATCACTTTGTTCATGGGATCCTTGCAAGAGGCCAACTGCTGCAGAGGCCCTCCAACATCCTTTCTTTCAGAGTTGCTTTTACATTCCTCCATCCCTCCGCACCAAAGCCGTAGCTAGGACGCCTCCATCTGCTGGAACAAGGGGATCACTGGATCGGCAAGGGGTTAAGAGATATTCCTGCACTCTGTCTAATTCAAAGCTCACCAATAACCATTCCTCCCCGAAGTTACATCCTTCATTAGCTATAGGTGTACACCGGAAGCTAGATATGGCAAATGAGGATGGAAATAAGACTGACAAGTCCTTGAAGAATACCACCAAACAACCAAAATATCGACCACCAGGAAAGGACAGCCCAACTTCAATGAACAAGGGAAGGACTAGTACTGTGCGTGGGGTTTCGGAAACAGCTGATAAGTTGGCTAATATGGCGGTTAGTGCTCGAAGACAATCAATGGGTGCGCCTCCCATGAAAGCCGGAGGGCATTGGTTTACTGAACCTCGAAACTTTCAAGATATTCCAGCTGCAAGAGCTTACTTCAGAAAAGTTGCTGGATGA 1341 0.4377 MERYKLIKEVGDGTFGSVWRALNKQNGEVVAIKKMKKKYYSWEECVNLREVKSLRRMNHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDRENVFSESEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKDIIKIADFGLAREISSQPPYTEYVSTRWYRAPEVLLQSYLYTSKVDMWAMGAIMAELFTLRPLFPGANEADEIYKICGVIGSPTVESWAEGLKLARDINYQFPQLPGVHLSTLIPSVSVNAISLITSLCSWDPCKRPTAAEALQHPFFQSCFYIPPSLRTKAVARTPPSAGTRGSLDRQGVKRYSCTLSNSKLTNNHSSPKLHPSLAIGVHRKLDMANEDGNKTDKSLKNTTKQPKYRPPGKDSPTSMNKGRTSTVRGVSETADKLANMAVSARRQSMGAPPMKAGGHWFTEPRNFQDIPAARAYFRKVAG 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g1154 446 MobiDBLite consensus disorder prediction 381 396 - -
Lele53g1154 446 SUPERFAMILY Protein kinase-like (PK-like) 1 287 IPR011009 -
Lele53g1154 446 CDD STKc_MAK_like 4 283 - -
Lele53g1154 446 MobiDBLite consensus disorder prediction 353 367 - -
Lele53g1154 446 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Lele53g1154 446 Gene3D Phosphorylase Kinase; domain 1 1 82 - -
Lele53g1154 446 ProSiteProfiles Protein kinase domain profile. 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele53g1154 446 SMART serkin_6 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele53g1154 446 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 3 338 - -
Lele53g1154 446 MobiDBLite consensus disorder prediction 353 396 - -
Lele53g1154 446 FunFam serine/threonine-protein kinase MAK isoform X1 84 293 - -
Lele53g1154 446 FunFam cyclin-dependent kinase F-4-like 1 83 - -
Lele53g1154 446 ProSitePatterns Protein kinases ATP-binding region signature. 10 34 IPR017441 GO:0005524
Lele53g1154 446 Pfam Protein kinase domain 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele53g1154 446 Gene3D Transferase(Phosphotransferase) domain 1 83 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g1154 Lele-ChrLele53 20470032 20473511 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g1154 1 290 Core Cell Cycle Gene Families AT3G48750 36.577 2.45e-66 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Lele53g1154 Pkinase 1.8e-75 CL0016