Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g1153 ATGGTTCCGAACCTGTACCAGCCTTTCGTAGCTAAGATGGTGAGGTTGAAGCATCGGAAGAAAAAGCAATCTGAAACCAGAAGACCGAAACATTTACTTGACTCGGCGTGTGGCTGTGCTGAGTCTCAGAGGGACAAAGAACAAGAAGCAGTTGAGGTTTGCTTGACGGCTTTCTTTCGCTCTACTCTGATCCCGAGCTCATTGAGGATTGCTTTTCCTTCTTCTCTTTTGCTAGGACCATTTTGAAGGAGAAAAAAGGTTGTAAAAGTAAAGATGTTTACATGCATAGCTTGTACAAAGCAATTGGAGGAGGAGAGGGAAGTTGAAGGAGGAGCCCATGAGAGTGGCACGCCGAGTACAAAAGAAGCCGTCAAAAGCCTGACGACGCAGATAAAGGATATGGCCCTTAAGTTTTCTGGTGCCTATAAGCAATGCAAACCGTGCACAGGATCCAGTAGTTATAAGAAAGGGCAGAGACCTTATCCAGATTTTGATACCATCTCTGAAGGAGTTCCATACCCTTATATAGGAGGGGCAAGCTCTAGTTCAACCCCCGCATGGGACTTCATCGGATCCCATTACCCGGCTTGTAGATCTGACCAGAGATTTGTTGGGCCATTTTCTGGTGACGAAACCCCAAGAGGTCGCGAATCGGCATCAGCCTGTGATGTAGTGTTGGAAAAAGAGGATGAACCCAAGGAGTGGATGGCACAGGTGGAGCCAGGGGTTCACATTACATTTGTGTCTCTTCCTAATGGGGGAAATGATCTCAAAAGAATTCGCTTCAGCCGAGAGATGTTCGATAAATGGCAAGCTCAAAGATGGTGGGGTGAGAATTACGATCGAATCATGGAGCTCTATAATGTCCAGAGATTCAATCGACAAATCAACACTCCTACAAGATCTGAAGATGAGCAAAGAGATTCTTCTTACTCGAGACTGGGATCTACAAGAGATAGCCCCATGGGCTCATCATTAAAAGAATGGACGCCAAGGAACTATCCTAAAACCCCAGGAAACAGAGGGTACTACCCATCTGAACTGTCAGATCAAGGTGTAGGACCCCATTTCCGCGGAGGTTCTTCGTTTGAAGCATCCCGTACGACAACCTCTTCTAGAGATGAACCTTCTGTTAGCAGTGACATGGAGGCAGAATGGGTAGAGCAAGATGAGCCTGGAGTTTACATTACTATCAGACAGTTACCGGACGGCACAAGGGAGCTTCGACGTGTCAGATTCAGTAATGATACGACTCCTCGAGAGTCTGCATAG 1272 0.467 MVPNLYQPFVAKMVRLKHRKKKQSETRRPKHLLDSACGCAESQRDKEQEAVEVCLTAFFRSTLIPSSLRIAFPSSLLLGPFXRRKKVVKVKMFTCIACTKQLEEEREVEGGAHESGTPSTKEAVKSLTTQIKDMALKFSGAYKQCKPCTGSSSYKKGQRPYPDFDTISEGVPYPYIGGASSSSTPAWDFIGSHYPACRSDQRFVGPFSGDETPRGRESASACDVVLEKEDEPKEWMAQVEPGVHITFVSLPNGGNDLKRIRFSREMFDKWQAQRWWGENYDRIMELYNVQRFNRQINTPTRSEDEQRDSSYSRLGSTRDSPMGSSLKEWTPRNYPKTPGNRGYYPSELSDQGVGPHFRGGSSFEASRTTTSSRDEPSVSSDMEAEWVEQDEPGVYITIRQLPDGTRELRRVRFSNDTTPRESA 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g1153 423 MobiDBLite consensus disorder prediction 298 312 - -
Lele53g1153 423 Pfam Transcription factor regulating root and shoot growth via Pin3 233 287 IPR013591 -
Lele53g1153 423 Pfam Transcription factor regulating root and shoot growth via Pin3 383 418 IPR013591 -
Lele53g1153 423 ProSiteProfiles BRX domain profile. 233 288 IPR013591 -
Lele53g1153 423 MobiDBLite consensus disorder prediction 362 377 - -
Lele53g1153 423 MobiDBLite consensus disorder prediction 313 331 - -
Lele53g1153 423 PANTHER PROTEIN BREVIS RADIX-LIKE 1 92 421 IPR044532 -
Lele53g1153 423 MobiDBLite consensus disorder prediction 297 386 - -
Lele53g1153 423 Pfam Transcription factor BRX N-terminal domain 113 148 IPR027988 -
Lele53g1153 423 ProSiteProfiles BRX domain profile. 384 423 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g1153 Lele-ChrLele53 20463141 20468984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g1153 91 414 Major Intrinsic Protein MIP AT1G31880 65.165 1.94e-139 401