Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g1150 ATGTGGATGGCGGTCCAACCACCGTTCACGGTGGCGCAGTGGCAGGAGCTTGAACACCAAGCTCTCATCTTTAAGTACCTCAAGGCTGGTTTGGCCGTTCCCCTCGACCTCCTCATTCCCTTTCGCAGGAGTCTCGAATTGATGCCGCCGAAGTTCGTTCAACACCCGACTTTGGGTTATTGTTCGTATTACGGGAAGAAGATCGACCCAGAGCCCGGGAGGTGTCGAAGGACGGATGGGAAGAAGTGGAGATGCTCGAGAGATGCGCATCCGGACTCTAAGTACTGTGAACGGCACATGATACGCCGTCGTTACCGTTCAAGAAAGCCTGTGGAATCGCAACCAGCTGCTTCTCAGTCTTCGTCCAATTCGGCATTGGACGTTGTTGCTGCTGGGAGCAGAAGTGGCTCTGGAAGCCTCCAGAGCTTGCCCTTGCACGGAAATGGTGCTCGTGAGGGTTTGAACCTTGGAAATAACGTATCACAGCTTCAGATACAGTCTCTTCCTGTTGAGATTAGCAAGAAAGATTACAGGTTTGGACTGAATTCTGAAGCAGACGAGCACAATTTCTTACAGAAAGGATTGGGAAGCACGAGCTATCTCGGTTTCGACTCTACCTCAGACAACATGTGGCCTCATATCTCACAAGTTCCCTCGGACGTGGTCTCAGAGTCAAGAAATAGTTCTACTATTGTTAGCAGCTGCTTCCAGTTAGGGACCATGCGAGATACTGAGCCACGGAACGTGAATGCTGCAAGATCAAAGCAACACTTCTATGGTGATCAGCTTAGTTTGGCTGGGTGTTTGAAACAGGAATATCAGTCGCCACAGACTTTTTCAACCGACTGGCTCTGGAAGAACTCAAGCTCCCCGTCTGTTGAGTATGATAGATCCAATAAAGGTTCTAGCTGTAACTCTGGTAGTATGAATCCCTTTCAGTGA 942 0.4968 MWMAVQPPFTVAQWQELEHQALIFKYLKAGLAVPLDLLIPFRRSLELMPPKFVQHPTLGYCSYYGKKIDPEPGRCRRTDGKKWRCSRDAHPDSKYCERHMIRRRYRSRKPVESQPAASQSSSNSALDVVAAGSRSGSGSLQSLPLHGNGAREGLNLGNNVSQLQIQSLPVEISKKDYRFGLNSEADEHNFLQKGLGSTSYLGFDSTSDNMWPHISQVPSDVVSESRNSSTIVSSCFQLGTMRDTEPRNVNAARSKQHFYGDQLSLAGCLKQEYQSPQTFSTDWLWKNSSSPSVEYDRSNKGSSCNSGSMNPFQ 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g1150 313 Pfam QLQ 8 40 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele53g1150 313 ProSiteProfiles QLQ domain profile. 8 43 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele53g1150 313 ProSiteProfiles WRC domain profile. 69 113 IPR014977 -
Lele53g1150 313 MobiDBLite consensus disorder prediction 112 130 - -
Lele53g1150 313 Pfam WRC 70 112 IPR014977 -
Lele53g1150 313 PANTHER GROWTH-REGULATING FACTOR 5 8 288 IPR031137 GO:0005634|GO:0006351|GO:0032502
Lele53g1150 313 MobiDBLite consensus disorder prediction 106 130 - -
Lele53g1150 313 MobiDBLite consensus disorder prediction 289 313 - -
Lele53g1150 313 SMART QLQ_2 7 43 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g1150 Lele-ChrLele53 20443455 20446172 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g1150 6 112 GRF Transcription Factor Family AT3G13960 57.658 1.75e-39 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Lele53g1150 WRC 1.2e-19 No_clan