Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g1143 ATGGAGAGGGGATATGAAGGAGGAGGGAATTTTGGGTTTGAGAATGCGGTGGTGATGACCAGAGATCCGAAGCCAAGGCTGAGATGGACGGCTGATCTTCATGATCGATTCGTCCATGCCGTCACCAAGCTTGGTGGCCCCGACAAAGCGACTCCCAAGTCTGTGTTGAGACTAATGGGTTTGAAAGGCTTGACTTTGTATCATTTGAAGAGTCATTTACAGAAATATAGACTTGGACAGCAGGCACGGAAGCAAAACAGTGAAGAACAACCCAAAGAGAACAATAATAAAGGTGCATATGTACATTTTAGTGATCATTCTTCGGGGCCTAACACCAATTACAGAGGCAATAACCAAACAGAGGAAATCCCATTAGCAGAGGCTCTGAAGCGTGGGATCGAAGTCCAAAAGCATTTGGAAGAGCAGCTGGAGGTACAGAAGAAATTGCAGATGAGAATAGAGGCTCAAGGGAAGTATTTGCAAGCCATGCTTGAGAAAGCACAGAAGAGCCTTTCCCTGGACATGAATGGATCAAACAACCTAGAAGCAGCAAGAGCTCAATTGACAGATTTCAACTCTGCTTTGTCCAATTTCATGGAGAATATGAACAGGAACAACAAAGAAAACATCATGGACATGAATGATTTCTACAAGAAAGCTCACACTTCATCGGCTTTCGGAATTTACCAGGAAGCAGAGGGAGAAGATCACAAGGATCAAAAGCCTAAGGTTGAAGAAGGTTCAATACAGTTTGACTTAAACATCAAAGGTAGCTATGACTTTGTATCAGCAGGTGCAGTTAAAATGGATTCCAAGGTTATTTCTTACAGAGTGTAA 837 0.4313 MERGYEGGGNFGFENAVVMTRDPKPRLRWTADLHDRFVHAVTKLGGPDKATPKSVLRLMGLKGLTLYHLKSHLQKYRLGQQARKQNSEEQPKENNNKGAYVHFSDHSSGPNTNYRGNNQTEEIPLAEALKRGIEVQKHLEEQLEVQKKLQMRIEAQGKYLQAMLEKAQKSLSLDMNGSNNLEAARAQLTDFNSALSNFMENMNRNNKENIMDMNDFYKKAHTSSAFGIYQEAEGEDHKDQKPKVEEGSIQFDLNIKGSYDFVSAGAVKMDSKVISYRV 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g1143 278 Coils Coil 181 201 - -
Lele53g1143 278 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 21 81 IPR017930 -
Lele53g1143 278 MobiDBLite consensus disorder prediction 100 118 - -
Lele53g1143 278 MobiDBLite consensus disorder prediction 78 118 - -
Lele53g1143 278 SUPERFAMILY Homeodomain-like 24 81 IPR009057 -
Lele53g1143 278 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 15 220 IPR044848 GO:0003700
Lele53g1143 278 FunFam Myb family transcription factor 23 81 - -
Lele53g1143 278 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 24 79 IPR006447 GO:0003677
Lele53g1143 278 Pfam MYB-CC type transfactor, LHEQLE motif 124 170 IPR025756 -
Lele53g1143 278 Pfam Myb-like DNA-binding domain 27 77 IPR001005 -
Lele53g1143 278 Gene3D - 23 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g1143 Lele-ChrLele53 20406988 20409118 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g1143 5 191 G2-like Transcription Factor Family AT4G13640 49.479 1.40e-59 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele53g1143 Myb_DNA-binding 4.7e-07 CL0123