Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g1135 ATGGAAGCTTCTTGCCCAGTGTACCCAACAACACAATCTCTCAACACAAAACGCTCCTTCTCATCTCCATCAAAATCACATTTGGGTTATTTTGCCCAGAAACATGAGCAGCTAGTGATCTTCAGGGGAAGAACAAGAAGAAGAAGCAGCAGCCCATGTGTGATAACATGTGGTGCAGTAGCAGGAGATCATGATCAGACGGTTGTGATTGGTCTTGCTGCAGATTCAGGCTGTGGAAAGAGCACATTCATGAGAAGACTAACAAGTGTGTTTGGAGGAACAGCAGAACCACCAAAAGGAGGGAATCCAGATTCCAACACTCTCATTAGTGACACAACAACGGTTATTTGCTTAGATGATTATCATTCATTGGACAGAAATGGAAGGAAAGAGAAAGGAGTCACAGCACTTGATCCAAGAGCCAACGATTTTGATCTCATGTATGAACAAGTTAAGGCACTTAAAGATGGAATTGCAGTGGATAAACCTATTTATAATCATGTCACTGGTCTCTTGGATCCACCTGAACTCATCAAGCCTCCCAAAATCTTAGTCATTGAAGGTTTGCATCCAATGTTTGATGCGCGGGTGAGAGAACTGTTGGACTTCAGTATCTACTTGGACATCAGCAATGAAGTGAAATTCGCTTGGAAAATTCAGAGAGACATGGCAGAGCGTGGACACAACCTTGAAAGCATCAAAGCTAGTATTGAAGCTCGGAAGCCTGATTTTGAAGCCTTTATTGATCCTCAGAAGCAACATGCAGATGCAGTGATAGAAGTGTTGCTAACTCAGCTCATTCCAAATGATAATGAAGGAAATATTTTAAGAGTGAGGTTAATACAGAAAGAAGGGGTTAAGCATTTTAACCCTACTTACTTGTTTGATGAAGGATCTACCATTTCCTGGATACCATGTGGCAAGAAGCTAACTTGCTCTTATCCTGGCATTAAGTTCTTCTACAGGCCCGAGACTTACTATGGCAACGAGGTATCAGTTGTGGAGATGGATGGGAAATTTGACAAACTAGATGAACTGATTTATGTTGAGAGCCATCTCAGTAACCTCTCAACAAAATTCTATGGAGAGGTAACACAGCAGATGTTGAAACATGCAGATTTCCCAGGAAGCAACAATGGCACAGGTTTTTTCCAGACCATAATTGGTTTGAAGATCAGAGATTTATACGAACAAATAATAGCCAGCAGGGCTAAGACTCCAGTAGGAGCAGCACAAGCCTAG 1242 0.4195 MEASCPVYPTTQSLNTKRSFSSPSKSHLGYFAQKHEQLVIFRGRTRRRSSSPCVITCGAVAGDHDQTVVIGLAADSGCGKSTFMRRLTSVFGGTAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRNGRKEKGVTALDPRANDFDLMYEQVKALKDGIAVDKPIYNHVTGLLDPPELIKPPKILVIEGLHPMFDARVRELLDFSIYLDISNEVKFAWKIQRDMAERGHNLESIKASIEARKPDFEAFIDPQKQHADAVIEVLLTQLIPNDNEGNILRVRLIQKEGVKHFNPTYLFDEGSTISWIPCGKKLTCSYPGIKFFYRPETYYGNEVSVVEMDGKFDKLDELIYVESHLSNLSTKFYGEVTQQMLKHADFPGSNNGTGFFQTIIGLKIRDLYEQIIASRAKTPVGAAQA 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g1135 413 MobiDBLite consensus disorder prediction 1 24 - -
Lele53g1135 413 Gene3D - 64 300 IPR027417 -
Lele53g1135 413 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 66 338 IPR027417 -
Lele53g1135 413 FunFam Phosphoribulokinase 64 294 - -
Lele53g1135 413 Pfam Phosphoribulokinase / Uridine kinase family 69 267 IPR006083 GO:0005524|GO:0016301
Lele53g1135 413 PANTHER URIDINE KINASE 64 314 - -
Lele53g1135 413 PRINTS Phosphoribulokinase family signature 236 259 IPR006082 GO:0005524|GO:0005975|GO:0008974
Lele53g1135 413 PRINTS Phosphoribulokinase family signature 74 91 IPR006082 GO:0005524|GO:0005975|GO:0008974
Lele53g1135 413 PRINTS Phosphoribulokinase family signature 218 235 IPR006082 GO:0005524|GO:0005975|GO:0008974
Lele53g1135 413 PRINTS Phosphoribulokinase family signature 183 201 IPR006082 GO:0005524|GO:0005975|GO:0008974
Lele53g1135 413 CDD PRK 69 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g1135 Lele-ChrLele53 20349014 20352117 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g1135 63 259 PRT Gene Family AT1G55810 27.941 3.21e-15 75.5