Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g1125 ATGGATAAAACTTCAAACGACAAGGAGCCGAAGACTCCTGCTGCTTCGTCACAGGAGCAGCCTTCAACCACCAGCACTGGAGCGATAAATCCTGACTGGTCTAGCTTTCAGACATATTCTCCTATACCTCCACATGGATACTTGGCATCAAGTCCGCAAGCCCATCCGTATATGTGGGGCGTCCAGCCTATTATGCCTCCCTACGGTACTCCACCACATCCTTATGTTGCAATGTACCCCCCTGGTGGCATATATGCTCATCCATCAATGCCTCCGGGATCTTATCCTTTTAGTCCTTTTGCCATGCCTACTGCTAATGGTATTGCTGATGCTTCAGGAAACACGCCTGGCAGCATAGAAGGTGATGCTAAGCCTCCTGAGGTGAAGGAAAAATTGCCAGTAAAAAGATCAAAGGGAAGTTTGGGCAATTTGAATATGATCACGGGGAAGAATAATGAACTTGGTAAAAATCCAGGGACGTCTGCAAATGGAATTCATTCAAGAAGTGGTGAGAGTGCAAGCGAAGATACAAGTGAAGGAAGTGATGCAAATTCTCAAGATGACTCTGAGTACAAATCAGGAGGCAGGCATAATTCCTTAGAAGCTGAACCACTTCACAATGGAAGTTCAGTGCATGCTTCTCAAAATGGGGGAGTTAATACACATCATAAGGTGGTTAATCAAGTTGTGCCTATCTCTGCCACTGGTGCTCCTGTAGCTGTTCCTGGTCCCCCAACAAACCTAAATATCGGAATGGATTATTGGGGAGCACCAACTTCTTCTGCAATTCCTGCAATGCATGGAAAGGTTACTTCTACTGCAGTTGCTGGGGGAATGGTTACTGCTGGATCACGGGATAATGTCCAGTCACAACTTTGGCTTCAGGATGAAAGAGAGCTTAAAAGACAAAGACGGAAGCAATCTAATAGAGAATCAGCTCGCAGATCCAGGTTGCGCAAGCAGGCAGAGTGCGATGAACTAGCGCAGCGTGCTGAGGCCTTGAAAGAAGAAAATGCTTCTCTCCGGTCAGAAATGAGTCGAATCAAGAGCGAGTACGAACAGTTGCTCTCAGAGAATGCAGCACTCAAGGAGAGACTGGGGGAACATCCTGAGAAAGAAGATTTGAGGTCAGGCCAGAATGATGAAATTGCAAGTGACGAAGCTCAACAAACTGAGCAGGAGGAGGCTGCGAAGGGTGATCAGTAG 1206 0.4685 MDKTSNDKEPKTPAASSQEQPSTTSTGAINPDWSSFQTYSPIPPHGYLASSPQAHPYMWGVQPIMPPYGTPPHPYVAMYPPGGIYAHPSMPPGSYPFSPFAMPTANGIADASGNTPGSIEGDAKPPEVKEKLPVKRSKGSLGNLNMITGKNNELGKNPGTSANGIHSRSGESASEDTSEGSDANSQDDSEYKSGGRHNSLEAEPLHNGSSVHASQNGGVNTHHKVVNQVVPISATGAPVAVPGPPTNLNIGMDYWGAPTSSAIPAMHGKVTSTAVAGGMVTAGSRDNVQSQLWLQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEALKEENASLRSEMSRIKSEYEQLLSENAALKERLGEHPEKEDLRSGQNDEIASDEAQQTEQEEAAKGDQ 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g1125 401 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 299 362 IPR004827 GO:0003700|GO:0006355
Lele53g1125 401 MobiDBLite consensus disorder prediction 203 218 - -
Lele53g1125 401 SUPERFAMILY Leucine zipper domain 300 356 IPR046347 GO:0003700|GO:0006355
Lele53g1125 401 MobiDBLite consensus disorder prediction 362 381 - -
Lele53g1125 401 Pfam G-box binding protein MFMR 3 91 IPR012900 -
Lele53g1125 401 MobiDBLite consensus disorder prediction 185 199 - -
Lele53g1125 401 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 304 319 IPR004827 GO:0003700|GO:0006355
Lele53g1125 401 PANTHER G-BOX-BINDING FACTOR 3-RELATED 8 392 IPR044827 GO:0003700|GO:0006355|GO:0043565
Lele53g1125 401 Pfam Disordered region downstream of MFMR 130 264 - -
Lele53g1125 401 Gene3D - 300 354 - -
Lele53g1125 401 MobiDBLite consensus disorder prediction 141 180 - -
Lele53g1125 401 MobiDBLite consensus disorder prediction 360 401 - -
Lele53g1125 401 MobiDBLite consensus disorder prediction 10 41 - -
Lele53g1125 401 Pfam bZIP transcription factor 297 359 IPR004827 GO:0003700|GO:0006355
Lele53g1125 401 SMART brlzneu 297 361 IPR004827 GO:0003700|GO:0006355
Lele53g1125 401 MobiDBLite consensus disorder prediction 299 322 - -
Lele53g1125 401 CDD bZIP_plant_GBF1 302 352 IPR045314 GO:0003700|GO:0006355
Lele53g1125 401 MobiDBLite consensus disorder prediction 1 41 - -
Lele53g1125 401 Coils Coil 317 365 - -
Lele53g1125 401 MobiDBLite consensus disorder prediction 109 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g1125 Lele-ChrLele53 20292404 20297580 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g1125 1 389 bZIP Transcription Factor Family AT2G35530 64.141 4.82e-166 469
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele53g1125 MFMR_assoc 1.3e-50 No_clan