Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g1124 ATGGCTGAAGCCAAATACAAAAGCTCCAATCTCAGCTCTGCTTTGAAATATTCCAAGCGAGCCCAACTTCTTGTTCATGACCTCGATGGTATCTCCGAAATGGTCACTTCCTTCGACACTGTTAGTGTAGCCTCAGAATCGCCCACTCCTGGCTGGTACAAGATACTCCAGGTTGAGCCCTTTGCTCACCCCAACGTCATTCGAAAGCATTACAAGAAGCTAGCTTTGACTCTTCACCCGGACAAGAATCCCCATGTGGCTTCCGAGGAGGCGTTCAAGCTCGTCAGTGTGGTGTTTCGATTTCTTTCTGATAAAATTCGGAGGAAGGACTACGATATGAAGCTGAGGATTTGGATTCAGGATGAGGCGACAGAGGGTTAG 381 0.4803 MAEAKYKSSNLSSALKYSKRAQLLVHDLDGISEMVTSFDTVSVASESPTPGWYKILQVEPFAHPNVIRKHYKKLALTLHPDKNPHVASEEAFKLVSVVFRFLSDKIRRKDYDMKLRIWIQDEATEG 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g1124 126 CDD DnaJ 52 104 IPR001623 -
Lele53g1124 126 SMART dnaj_3 50 107 IPR001623 -
Lele53g1124 126 Gene3D DnaJ domain 37 125 IPR036869 -
Lele53g1124 126 PRINTS DnaJ domain signature 87 107 IPR001623 -
Lele53g1124 126 PRINTS DnaJ domain signature 53 71 IPR001623 -
Lele53g1124 126 PRINTS DnaJ domain signature 71 86 IPR001623 -
Lele53g1124 126 SUPERFAMILY Chaperone J-domain 46 118 IPR036869 -
Lele53g1124 126 ProSiteProfiles dnaJ domain profile. 51 115 IPR001623 -
Lele53g1124 126 PANTHER BNAC03G44070D PROTEIN 1 116 - -
Lele53g1124 126 Pfam DnaJ domain 52 112 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g1124 Lele-ChrLele53 20290970 20291350 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g1124 1 117 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 31.200 2.29e-12 60.5