Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g1105 ATGACATTGGTAAGAGAAAGGAGACACCAGGAAGCTCTAAGGCTTTCCTTACCATCACCTCCAATTCCAGAACCATATTTCTGCCATCAAACCCATATCTCCGCCTCCTATAGCAATTCTCTGTCCACCAAGAACCTTTTGAGCTTCGAGAAACTCACAGTTCTTGGCCATGGCAATGGTGGTACAGTGTATAAAGTCCATCACAAGAAGAACAAAACCTTCTATGCTTTGAAAGTCCTCAGGTTCAACCAGAATGCTCTTGAAATCTCTCAGCAGGCGAAACGTGAGGCAGAGATTCTCAGAAGAGTGGATTCCCCATATATTGTGAGGTGCCATGCAGTTTTTGACAATAACTGCAGTGAATCTCATGTAAATGGAGGTGGTGGTGGTGGTGGTGGTGGAATTAGCTTTGTAATGGAATACATGGAAAGAGGTTCATTACATGATGTATTGCGAGAACACAAATCACTACCAGAAGAAGTGGTATCAGTATTGACAAAGAGAGTTTTGGAAGGACTCAACTATTTGCATGGCATGAACATAGTGCACAGAGATATCAAACCTTCAAACTTGCTTGTGAATGACAAAGGGGAAGTTAAGATTGCAGATTTTGGAGTGAGTCATGTGGTAGGAGGAAGGTTTGAGGCATCAGATTGTAACGCAGGCACGTGTGCTTATATGGGCCCAGAAAGAATTGATCCTGAGAGATGGGATGGTGAAAATGCAGATGGGTTTTCTGGGGATGTTTGGTCAGTAGGAGTTTTGATGTTAGAATGTTTTCTGGGTCATTTCCCTTTTACTGATGCAGGTCAAAAACCAGACTGGGTTACATTGATGTGTGTGATTTGTTCTGGTGAGAAGCTTGAAATGCCAGAAAAGGCTTCAGCTGAGTTCAAAAACTTTGTGCAAAGATGTTTGGAGAAGGATTGGAGGAAACGAGCAACAGTTGGTGAGCTTCTTCATCACCCTTTTGTGAATACCAAATCTAGCCCTTCTTCTAGCAATGTATTGCTCAATTATCTTCTGCATTGTTGA 1035 0.4242 MTLVRERRHQEALRLSLPSPPIPEPYFCHQTHISASYSNSLSTKNLLSFEKLTVLGHGNGGTVYKVHHKKNKTFYALKVLRFNQNALEISQQAKREAEILRRVDSPYIVRCHAVFDNNCSESHVNGGGGGGGGGISFVMEYMERGSLHDVLREHKSLPEEVVSVLTKRVLEGLNYLHGMNIVHRDIKPSNLLVNDKGEVKIADFGVSHVVGGRFEASDCNAGTCAYMGPERIDPERWDGENADGFSGDVWSVGVLMLECFLGHFPFTDAGQKPDWVTLMCVICSGEKLEMPEKASAEFKNFVQRCLEKDWRKRATVGELLHHPFVNTKSSPSSSNVLLNYLLHC 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g1105 344 ProSitePatterns Protein kinases ATP-binding region signature. 55 78 IPR017441 GO:0005524
Lele53g1105 344 PRINTS Tyrosine kinase catalytic domain signature 175 193 IPR001245 GO:0004672|GO:0006468
Lele53g1105 344 PRINTS Tyrosine kinase catalytic domain signature 247 269 IPR001245 GO:0004672|GO:0006468
Lele53g1105 344 PRINTS Tyrosine kinase catalytic domain signature 139 152 IPR001245 GO:0004672|GO:0006468
Lele53g1105 344 SUPERFAMILY Protein kinase-like (PK-like) 49 331 IPR011009 -
Lele53g1105 344 ProSiteProfiles Protein kinase domain profile. 49 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele53g1105 344 SMART serkin_6 49 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele53g1105 344 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 36 329 - -
Lele53g1105 344 Gene3D Phosphorylase Kinase; domain 1 29 139 - -
Lele53g1105 344 Gene3D Transferase(Phosphotransferase) domain 1 140 340 - -
Lele53g1105 344 CDD PKc_MAPKK_plant_like 48 326 - -
Lele53g1105 344 Pfam Protein kinase domain 49 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele53g1105 344 ProSitePatterns Serine/Threonine protein kinases active-site signature. 181 193 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g1105 Lele-ChrLele53 20162329 20163363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g1105 1 328 MAP Kinase Kinase Gene Family AT1G32320 50.751 1.65e-110 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Lele53g1105 Pkinase 1.8e-63 CL0016