Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g1104 ATGCATCTACTTTCATGTTTGTATATACTGACTGAAAAGTTTTGCTTTTCTATTGAACATGTGATTTACCTCCTTCCTATCTCTTTTTCTATTGTCGACATAATTAAACAGGGTTTCAGGAAGGTTGATCCAGATAGGTGGGAATTTGCTAATGAGGGATTTTTGAGGGGTCAGAAGCACTTGCTTAAGAGCATAACGAGGCGAAAACCTGCCCATGGTCATAGTCATCAACAGGCACAACAATCTCATGGGCAGAGTTCATCTGTAGGGCCATGTGTAGAGGTTGGGAAGTTCGGTCTAGAGGAAGAGGTTGAAAGGCTCAAAAGAGATAAGAATGTCCTCATGCAGGAGCTTGTGAGGTTGAGACAGCAGCAACAGGCCACTGATAACCAGATGCAACAAGTGGTTCAGCGCCTTCAGGGAATGGAACAACGTCAGCAGCAAATGATGTCATTCCTTGCAAAGGCTGTCCAGAGTCCTGGCTTCTTGACTCAGTTCGTACAACAGCAAAATGAGAGCAACAGGCGCATAACTGAAGCCAACAAAAAACGAAGGCTTAAGCAGGAAGGTATTGCTGAAACAGAGTATGCTACTGCTTCTGATGGACAAATTGTTAAGTATCAACCTTTGATGAATGACGCTGCTAAAGCAATGCTAAGGCAGATCTTGAAATTGGATACCCCTTGGCTAGAATCTTTTGATAATAACTCAGACAGTTACTTGATTGGCAATGGCTCCATATCGTCAGGGGCAATGGACAGTGGCAGCACTTCAAATCGGAGCTGTGGAGTAACCCTTCAAGAGGTCCCCCCAACTTCAGTGAATGCTTCCTCAGCTGGAAAATCTGAAAAACAATCTTCTCCACAGTCTGCAGCTTCTGAAAAAGTTATGACTGCTCAATATCCCGATGTAAATGTGCTGGTTGGTGCATCTGAGAAACCTTCTGTCTCTGTTTCTGTCGTAGATGTCATGCCTGAGCTTTCTCCGATGCCAGAGATGGCGACGGGAAGTATTCTTGATATTCCTGAAGAAAATTATATGGGACCTGAAACAGGAAATGACGGAGTCATGGATCCTAACGTATTTGGGGTAAATGGGGTGATGCCCATTGATATTGGTAGCATTTCACCCGATACAGACATTGATGACTTGTTATGCAACTCTTCTTTTTGGGATGACTTGGTGCAAAGTCCACTGCCTGAGGATATCGAGATTGATGCTTCTGATGCGTCCAAGGGAAATGAGGTCCAGCCAGTGGAAAATGGATGGGACAAAGAACATATGGATCAACTTACAGAGCAGATGGGTCTTCTTTCTTCTGATGCCAAAAGAGTTTGA 1338 0.4402 MHLLSCLYILTEKFCFSIEHVIYLLPISFSIVDIIKQGFRKVDPDRWEFANEGFLRGQKHLLKSITRRKPAHGHSHQQAQQSHGQSSSVGPCVEVGKFGLEEEVERLKRDKNVLMQELVRLRQQQQATDNQMQQVVQRLQGMEQRQQQMMSFLAKAVQSPGFLTQFVQQQNESNRRITEANKKRRLKQEGIAETEYATASDGQIVKYQPLMNDAAKAMLRQILKLDTPWLESFDNNSDSYLIGNGSISSGAMDSGSTSNRSCGVTLQEVPPTSVNASSAGKSEKQSSPQSAASEKVMTAQYPDVNVLVGASEKPSVSVSVVDVMPELSPMPEMATGSILDIPEENYMGPETGNDGVMDPNVFGVNGVMPIDIGSISPDTDIDDLLCNSSFWDDLVQSPLPEDIEIDASDASKGNEVQPVENGWDKEHMDQLTEQMGLLSSDAKRV 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g1104 445 MobiDBLite consensus disorder prediction 67 90 - -
Lele53g1104 445 Coils Coil 97 124 - -
Lele53g1104 445 MobiDBLite consensus disorder prediction 405 425 - -
Lele53g1104 445 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 38 282 IPR027725 -
Lele53g1104 445 MobiDBLite consensus disorder prediction 251 295 - -
Lele53g1104 445 MobiDBLite consensus disorder prediction 75 89 - -
Lele53g1104 445 SUPERFAMILY "Winged helix" DNA-binding domain 27 68 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g1104 Lele-ChrLele53 20159294 20160631 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g1104 24 439 HSF AT1G32330 48.260 2.08e-116 348