Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g1074 ATGAAGGCGATGGGGATAGTGAGAGGGATGATTAGTGAAAAGGGGATTAATGATGGAGGGAGGCATAGGAGTGAGAGAAGAAAAGACAGAAGACAAATCAGAGAGGCAAAGAAAAGCAGATGCCAAGGGAATGGCAGTTTTGACTCTTTTGATGACAACCCTTCTCCTTTATCCTCCTTCAATCCTCCATTTTCTGCACTTCCAGCACCACTTCTAGACCACAGACTTGAATATAATTCTTACCCATTTCTTGAGGGCTTCACTGGGAACACTCTTGACTCTGCACCACCACTTCAAGCTCATGAAGACCAAGAGCTTGCCTTTCTGGGTTTTGAGAATCAGAGTTCTGAAGAAGCAAATACCAACAATAATGCCAGTAATTGCTGCAAAATGGAACAAGCCTTGGAAGCTCCAGTGTTCAACAGGGGTGTGTGTTGTGCGGAGAAGAAACCCAAATCGAAGAAGCTAGAAGGGCAGCCCTCCAAGAATCTCATGGCGGAAAGAAGAAGAAGAAAGCGCCTCAATGATCGCTTGTCCATGCTAAGATCAATCGTCCCCAAGATCAGCAAGATGGACAGGACATCTATTCTTGGAGACACCATAAATTACATGAAGGAGCTTCTTGAAAAGATAAGCAAGTTGCAGAAAGAAATGGAGAAGGAGGGTGAAAATAATCAGTTGAACTTGATAGGCATTTCCAAGGAGGGGAAGCCAAGCGAAGTAATGGTGAGAAATTCCCCTAAGTTCGAGGTTGAGAGGAGAGACCAGGACACAAGGATCAATATCTGCTGCGCCACAAAGCCTGGATTACTACTCTCAACAGTGAACGCCTTGGAAGCATTAGGTCTTGAGATTCAACAATGTGTGACAAGTGGCTTCAATGATTTCACAATGCAAGCATCTTGCTCAGAGGTGGCTGAGCGGAGAGCTTGTATTGACTCTGAAGAGATTAAGGAAGCACTGTTCAGAAATGCAGGTTATGGTGGGAGATGTCTAGGGTTGAAATATGGGGACAACATCTGTAAATTCAGAAATGAAAGCCAGCTTTTGGCTCATAATCTCCCCTTCTCTTTCTCCAAACTCCAACTCTACTATTATGATTACCTTCAACTCTCAATCATTCCCGAAGTGAATGAAGAAATGTGTGAGAAGCTGTGA 1158 0.4404 MKAMGIVRGMISEKGINDGGRHRSERRKDRRQIREAKKSRCQGNGSFDSFDDNPSPLSSFNPPFSALPAPLLDHRLEYNSYPFLEGFTGNTLDSAPPLQAHEDQELAFLGFENQSSEEANTNNNASNCCKMEQALEAPVFNRGVCCAEKKPKSKKLEGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTINYMKELLEKISKLQKEMEKEGENNQLNLIGISKEGKPSEVMVRNSPKFEVERRDQDTRINICCATKPGLLLSTVNALEALGLEIQQCVTSGFNDFTMQASCSEVAERRACIDSEEIKEALFRNAGYGGRCLGLKYGDNICKFRNESQLLAHNLPFSFSKLQLYYYDYLQLSIIPEVNEEMCEKL 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g1074 385 MobiDBLite consensus disorder prediction 15 38 - -
Lele53g1074 385 Pfam Helix-loop-helix DNA-binding domain 164 207 IPR011598 GO:0046983
Lele53g1074 385 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 161 223 IPR036638 GO:0046983
Lele53g1074 385 Gene3D - 150 225 IPR036638 GO:0046983
Lele53g1074 385 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 158 207 IPR011598 GO:0046983
Lele53g1074 385 MobiDBLite consensus disorder prediction 9 55 - -
Lele53g1074 385 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 65 326 - -
Lele53g1074 385 Coils Coil 204 224 - -
Lele53g1074 385 SMART finulus 164 213 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g1074 Lele-ChrLele53 19957699 19960875 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g1074 81 332 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 56.349 7.96e-75 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele53g1074 HLH 2.2e-09 No_clan