LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele53g1041	ATGGATTTCAGAGGGAAAGGAGGGAGAGGAGAGGCGTTCGAGGAGGAGGCATCTCCTAGAGGCGTGCTGGAGATGACGGGGGAGTCAGATCGGGGTAGTAGCGGATGCAACACGTGCTCGGGGGAGAGACCGCCGCCGGCGGGGGGGCAGGGGCAGATGCCGCAGTGGAAGGGAGTGATGGACGCGCTGAGGATAAACTCAGTGAAAAGGCTGTCGGCGATACCGTTGTTCGCGTCGACGTACATGATATCTCGGAAGAGCCTGAAGAAATTGGCGCGCATCAGAAGCGCAGAAGACGCCATAGATCTTGTTTCTTTGGCCACCAAATCTTCCTGGAGACCCTTCTCTTACTCCGACCTTGCCGTTGCCACCGACGATTTCAGTCCTGAGAACTTGATCGGGAAAGGTGGGCATGCAGAGGTGTACAAAGGACGCTTACCTGATGGGCAAATCGTGGCAGTAAAGATGCTTATGAATGAGGAAAAGGACGACGGAGATCACACCGGTGATTTCTTGACGGAGCTTGGAATCATCGCCCACATCAACCATCCTAATTCTTGCAATTTGATTGGCTTCGGCATCGACAAGGGCCTCTTCTTCGTCCTTCACTATGCCGCTCATGGCAGCCTCTCCTCTCTCCTCTTCGGTTCCAAAAAGCTGGAGTGGAATGTTAGGTTCCAGGTAGCCATTGGAATTGCACAAGGACTGCAATATCTTCATCATGAATGCCCAAGACGAATCATTCACAGAGACATCAAGGCTTCCAACATCTTGCTCAATGAAAACTACGAACCTGAGATTTCAGATTTTGGATTGGCCAAGTGGCTCCCAGAAAAGTGGGACCACCATGTCGTCTTCCCTATAGAAGGCACATTTGGGTATCTAGCTCCAGAGTATTTTATGCATGGAGTTGTGGATGAAAAGACCGATGTTTTCGCTTATGGGGTTTTGTTACTTGAGATCATTACAGGTCGCATGGCTGTCGATTCTGATAGTAGACAAAGTCTTGTGATTTGGGCAAAGACTCTACTGGACGCGAAAAAAGTGAAGGAATTAGCAGACCCTAGATTAGAAGACGATTATGATCCTATAGAAATGGAGCGTGCCATGGTTACTGCTTCCGTGTGTGTAAACCACTCTGCTTCCAAGCGTCCCTTAATGAATCAGGTGGTGCAGATGCTGAAGGGAGAAGAAGGACCTGTTGAAGTAAAGCCACAAAAATCCACAGCCCCAAGATCCCTCATGTTAGATGCCTGTGATCTTGAAGATTATACTTGCTCCAGTTACTTGAACGATCTCAATCGTCACAGGCAATTAATCATGGAATGA	1329	0.4921	MDFRGKGGRGEAFEEEASPRGVLEMTGESDRGSSGCNTCSGERPPPAGGQGQMPQWKGVMDALRINSVKRLSAIPLFASTYMISRKSLKKLARIRSAEDAIDLVSLATKSSWRPFSYSDLAVATDDFSPENLIGKGGHAEVYKGRLPDGQIVAVKMLMNEEKDDGDHTGDFLTELGIIAHINHPNSCNLIGFGIDKGLFFVLHYAAHGSLSSLLFGSKKLEWNVRFQVAIGIAQGLQYLHHECPRRIIHRDIKASNILLNENYEPEISDFGLAKWLPEKWDHHVVFPIEGTFGYLAPEYFMHGVVDEKTDVFAYGVLLLEIITGRMAVDSDSRQSLVIWAKTLLDAKKVKELADPRLEDDYDPIEMERAMVTASVCVNHSASKRPLMNQVVQMLKGEEGPVEVKPQKSTAPRSLMLDACDLEDYTCSSYLNDLNRHRQLIME	442

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele53g1041	442	Gene3D	Phosphorylase Kinase; domain 1	99	204	-	-
	Lele53g1041	442	Gene3D	Transferase(Phosphotransferase) domain 1	206	410	-	-
	Lele53g1041	442	Pfam	Protein kinase domain	130	392	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele53g1041	442	PANTHER	OS08G0249100 PROTEIN	15	414	-	-
	Lele53g1041	442	MobiDBLite	consensus disorder prediction	1	18	-	-
	Lele53g1041	442	FunFam	receptor-like cytosolic serine/threonine-protein kinase RBK2	206	408	-	-
	Lele53g1041	442	MobiDBLite	consensus disorder prediction	1	54	-	-
	Lele53g1041	442	ProSiteProfiles	Protein kinase domain profile.	127	402	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele53g1041	442	SUPERFAMILY	Protein kinase-like (PK-like)	108	394	IPR011009	-
	Lele53g1041	442	SMART	serkin_6	127	439	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele53g1041	442	ProSitePatterns	Protein kinases ATP-binding region signature.	133	155	IPR017441	GO:0005524
	Lele53g1041	442	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	247	259	IPR008271	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele53g1041	Lele-ChrLele53	19758556	19761230	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele53g1041	115	397	Receptor kinase-like Gene Family	AT1G34210	44.027	6.44e-69	228

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-VI	Lele53g1041		Pkinase	3.5e-41	CL0016