Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele53g1020 | ATGCCCAAGGATGATTACCTTGCGAGATTGCATAGTGGGGACTTGGACTTGAGTGTTAGGAGAGAGGCTCTTGATTGGATTTGGAAGGTTCACACCTATTATGGTTTGGGACCATTGAGCTTTTGTTTATCCGTCAACTACTTTGATCGGTTCCTATCGATGTATAATTTACCTAGGAGCCAAAAATGGACTGGGCAATTGTTAGCTGTGGCTTGTTTGTCAATAGCAACCAAAGTGGAGGAAACCGAAATGCCTCGATTGATAGATTTTCAGGTTGAAGGACCGAAGTTTTTATTTGAAGCCAGAACCATTCAAAGAATGGAGCTATTGGTGCTGAACACATTGCAATGGAAAATGCATGCTTTCACTCCTTCTTCCTTCATAGAGTACTTCCTCATTAAAATCCCTTACCACCAACATACAGACACACTAAAGTCATCCATTTCTAGATCAATAGAGCTCATACTTAGTACAATCAGAGGTGTTGATTTCTTGGAATTCAGGCCTTCTGAGATAGCTGCAGCAGTGGCCATTTCTGTTTCAAGAGAAATGCAAGCAACTGAGATTGATAAGGCTATAACTTGTTTTGTGATTGTACAAAAGAAATAG | 609 | 0.4039 | MPKDDYLARLHSGDLDLSVRREALDWIWKVHTYYGLGPLSFCLSVNYFDRFLSMYNLPRSQKWTGQLLAVACLSIATKVEETEMPRLIDFQVEGPKFLFEARTIQRMELLVLNTLQWKMHAFTPSSFIEYFLIKIPYHQHTDTLKSSISRSIELILSTIRGVDFLEFRPSEIAAAVAISVSREMQATEIDKAITCFVIVQKK | 202 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele53g1020 | 202 | ProSitePatterns | Cyclins signature. | 20 | 51 | IPR006671 | - | |
| Lele53g1020 | 202 | SMART | cyclin_7 | 25 | 113 | IPR013763 | - | |
| Lele53g1020 | 202 | Pfam | Cyclin, N-terminal domain | 2 | 119 | IPR006671 | - | |
| Lele53g1020 | 202 | FunFam | D6-type cyclin | 116 | 202 | - | - | |
| Lele53g1020 | 202 | CDD | CYCLIN | 20 | 112 | IPR013763 | - | |
| Lele53g1020 | 202 | Gene3D | - | 1 | 187 | - | - | |
| Lele53g1020 | 202 | FunFam | D2/4-type cyclin | 3 | 115 | - | - | |
| Lele53g1020 | 202 | Pfam | Cyclin, C-terminal domain | 123 | 193 | IPR004367 | - | |
| Lele53g1020 | 202 | Gene3D | - | 3 | 120 | - | - | |
| Lele53g1020 | 202 | SUPERFAMILY | Cyclin-like | 3 | 120 | IPR036915 | - | |
| Lele53g1020 | 202 | PIRSF | Cyclin_A_B_D_E | 2 | 186 | IPR039361 | - | |
| Lele53g1020 | 202 | PANTHER | CYCLINS | 5 | 185 | IPR039361 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele53g1020 | Lele-ChrLele53 | 19620403 | 19622335 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele53g1020 | 1 | 192 | Core Cell Cycle Gene Families | AT5G65420 | 57.949 | 1.33e-79 | 237 |