Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g1014 ATGGAGGAAGCACTCAGGAGGCTTAACGGGTCAGCCCCGATTCCAGAACCCGAACCACAGGACTCCATCTCCGACCCCCCGAAGAAGTGCCCAGCCTCCACCACGACCAAGAAGACGGCCAGAGAAAACGGCGGCACTATGAGGTACCGCGGCGTTCGGCGCAGGCCCTGGGGCCGTTACGCGGCGGAGATACGAGACCCTCAGTCCAAGGAGCGACGATGGCTCGGAACTTTTGACACGGCGGAGGAAGCTGCATGCGCTTATGACTGCGCCGCCCGAGCCATGCGTGGCCTCAAAGCTCGAACCAATTTCGTTTACCCGACTTCACCGCCTAATTCTGCAACCACCGATCATCTCTTCCCTCATTTCGCCTTCCTCAAACAATCACACAATCAAATGAACAAGAATCTTAACCCTCATAACCGCCCTTTAGGCTGGCCTTCTTCTAGCTCTAGCCCTCACGTCTCCGATTTTTCATCTCCTCCGAATTCTTCTCTGAACATGTTTCTGTTTCGTGACTACCTTAACTCTGCTGCTAACCCATCTCTGGTTACTTCTGCTCAGCAACTTTACAACCCCATGAACAAGATCACATGTTCTTGTTCTGGCTCCTCGTCTTCCACATCTTTACCTCCGTCTAGTTCTGTCCCAGGTTGCTGTGTCGTGAATTCTGCTGGCGGCGATATGGAGGATGCCAAAATTACTGAAGCGGATGGAGAATCTGAATTATTTCCCAGAGAGCATTCAGACTCTGGATTGTTGGAAGAGATAGTCCATAGGTTCTTACCAAAATCATCAAAGCCCAACCAGCAGCAGTCGGAGGTTCGGGTGAAAGAGGAGAATCTGTCTCCGTCGACGCCACAGTTTCTTCCTCCTCAGCCAGTGTATAATGATCATGGCATGTTCACTTCCAACACTTATCCGAGCTATGAAAGTCTTAGGAATAAGGAGGTGACCAAGGCTGAGGACTATATTGTGTCCTATGATCACCAAGGTTTCCCCATGCAGCAATTTGACAGCTTTCACAATGGGTACAGCACAGGACAAGGCTTGCCTCTCAGAAGCGATCACCTCCACTTGATGAACGAAGCAGGGTACTCCATCATGGATGATATTTTCCAGTACCCAGATCTTCTTAATGAATTTGTAGCTAGGATACAAAATGCTTAA 1170 0.5017 MEEALRRLNGSAPIPEPEPQDSISDPPKKCPASTTTKKTARENGGTMRYRGVRRRPWGRYAAEIRDPQSKERRWLGTFDTAEEAACAYDCAARAMRGLKARTNFVYPTSPPNSATTDHLFPHFAFLKQSHNQMNKNLNPHNRPLGWPSSSSSPHVSDFSSPPNSSLNMFLFRDYLNSAANPSLVTSAQQLYNPMNKITCSCSGSSSSTSLPPSSSVPGCCVVNSAGGDMEDAKITEADGESELFPREHSDSGLLEEIVHRFLPKSSKPNQQQSEVRVKEENLSPSTPQFLPPQPVYNDHGMFTSNTYPSYESLRNKEVTKAEDYIVSYDHQGFPMQQFDSFHNGYSTGQGLPLRSDHLHLMNEAGYSIMDDIFQYPDLLNEFVARIQNA 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g1014 389 MobiDBLite consensus disorder prediction 1 45 - -
Lele53g1014 389 MobiDBLite consensus disorder prediction 262 294 - -
Lele53g1014 389 MobiDBLite consensus disorder prediction 27 42 - -
Lele53g1014 389 FunFam Ethylene-responsive transcription factor 2 47 106 - -
Lele53g1014 389 Gene3D AP2/ERF domain 47 106 IPR036955 GO:0003700|GO:0006355
Lele53g1014 389 SUPERFAMILY DNA-binding domain 48 105 IPR016177 GO:0003677
Lele53g1014 389 MobiDBLite consensus disorder prediction 140 159 - -
Lele53g1014 389 Pfam AP2 domain 48 97 IPR001471 GO:0003700|GO:0006355
Lele53g1014 389 CDD AP2 48 104 IPR001471 GO:0003700|GO:0006355
Lele53g1014 389 SMART rav1_2 48 113 IPR001471 GO:0003700|GO:0006355
Lele53g1014 389 PRINTS Ethylene responsive element binding protein signature 49 60 IPR001471 GO:0003700|GO:0006355
Lele53g1014 389 PRINTS Ethylene responsive element binding protein signature 71 87 IPR001471 GO:0003700|GO:0006355
Lele53g1014 389 MobiDBLite consensus disorder prediction 264 286 - -
Lele53g1014 389 ProSiteProfiles AP2/ERF domain profile. 48 105 IPR001471 GO:0003700|GO:0006355
Lele53g1014 389 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 36 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g1014 Lele-ChrLele53 19552089 19553258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g1014 1 264 AP2-EREBP Transcription Factor Family AT1G24590 40.493 1.65e-44 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele53g1014 AP2 2.9e-12 CL0081