Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g1012 ATGGAGAGGTGGGACCCACGATGTGTGCCTTGTCATTTTTCTAGTGGTCAGAATATAAGTGAAGTAAAACCTGCGGAGCATGCGAAAGTTTTCCCAAATGGATTTGATGGAAAGTGGGGTCCACATGGAGCTTCAATGGCGGGGGGAAAGAATGTGGGGTGGAGCCCCAGCGGGCCATCTCAAAAATCTTCTCTCCCATCGCCTCTCAATCCGAAGCTGGACCCCACTGCTCTCTTATCTCAACCCGAATCGGCCATGGTCGCAGTCGCGCCGGACTCTCCCAAATCCACCATCAAATTCCTATGCAGCTACGGCGGCAAAATCCTCCCCCGCTATCCCGACGGCAAGCTTCGTTATCTCGGTGGCCACACCCGTGTTCTTTCCGTCCCCGGCTCCATTTCTTTCTCCGAGCTGTTGTTGAAGATGGGAGAGTTGTGTGGCTCACCTGTTAGCCTCCGTTGTCAATTGCCCGCTGAAGATCTTGATGCTATGGTTTCAATCACCTCAGACGAAGATCTACCTAACCTCATCGAGGAATATGAACGTGTTGCGTCGCCGTCTTCCGTTTTAAAGATCAGAGCCTTCCTTTCTCCGCCAAAATCATTGAACAAAGTTTCTTCCTTTTCCTCCTCGTCGCCGTCCTCGTCGTTGTCTTTGTCCAGATCATCCTCATCTACGTCGTCTTCGTCGTCGTCTTCTTCATCCCGCAGTATTACTGCTGCTTGTGGTTGCTACGGTCTTGGTTCAAACCGGAGGTATCCGGTGATGCCGGCCATGGTCGACCGGATCATCCGCTCCAAGTCAGCGCCGATGGCCTATCCAATTTGCATAGGAAAGTCTTCTGGGATGAATATTCCGCTTCCTCACTGTGCTTATCATGCTCAGAGAAGCTCTGGTCACATTTACCTTATCCACAACGGGAACCATTGGCAGTAG 936 0.516 MERWDPRCVPCHFSSGQNISEVKPAEHAKVFPNGFDGKWGPHGASMAGGKNVGWSPSGPSQKSSLPSPLNPKLDPTALLSQPESAMVAVAPDSPKSTIKFLCSYGGKILPRYPDGKLRYLGGHTRVLSVPGSISFSELLLKMGELCGSPVSLRCQLPAEDLDAMVSITSDEDLPNLIEEYERVASPSSVLKIRAFLSPPKSLNKVSSFSSSSPSSSLSLSRSSSSTSSSSSSSSSRSITAACGCYGLGSNRRYPVMPAMVDRIIRSKSAPMAYPICIGKSSGMNIPLPHCAYHAQRSSGHIYLIHNGNHWQ 311
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele53g1012 311 SUPERFAMILY CAD & PB1 domains 114 204 - -
Lele53g1012 311 MobiDBLite consensus disorder prediction 201 238 - -
Lele53g1012 311 SMART PB1_new 112 197 IPR000270 GO:0005515
Lele53g1012 311 MobiDBLite consensus disorder prediction 46 76 - -
Lele53g1012 311 Pfam PB1 domain 114 195 IPR000270 GO:0005515
Lele53g1012 311 Gene3D - 116 196 - -
Lele53g1012 311 MobiDBLite consensus disorder prediction 54 70 - -
Lele53g1012 311 PANTHER OS05G0427100 PROTEIN-RELATED 88 238 - -
Lele53g1012 311 CDD PB1_UP2 101 196 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele53g1012 Lele-ChrLele53 19538351 19540270 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g1012 96 228 MAP Kinase Kinase Kinase AT1G04700 40.146 1.01e-28 114