Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g1006 ATGGCTCTGCTTCTAGGCGGTATTCAACCTCAGATACTAACTTCCCTTCGTCATGATCATAGAAAACCTTGCATCGGAGTTTGTCACGGGTCAGTTTCCTTCCTTCGATTTTGCCTGGAGGAAGCTGGTGGAACTTCTCCGAAAACGTTGAAATCCAAGATTCAGCTAAACCCGTTACTGTTCGGAGATTTCCATACCACATTTCTTAACAGCGTCTATCTTCTCCGCACAGAGTGCGGATGTTACAGTTTTCCGTTGGAATGTGCTTCTCTTGGTTCTGTTCTGTATAACTTCGGGAATATACATGTGGCCGAAATAAAGCACTTTCAAATCGCAGCATATGAGAAATCGAACAATCTTTTTCCGGCTGTTGTCACTAGTTTTTCATTTGAAACTTTCCATTTTGCATGCGAAATATGCTTCAATGGGATACGAGGCGGCTGTTTTGGTATTGCAAATATTATACTGGATATATCATTTTTTGACAATGTAACAGTTGGTGATCTGACAAGTAGGCTTGGTGCTGATTGCCAACAAGTTTCACGTGTTATTGGAAATGATCTTAACTTGATACTGCGCAATGTTCTTCAGGGAACAGGTGCATTAACCTACTTGTTATTTTTGTCTTGGCCACTTGGTTTATTTACTATGCTCTATATTAGCATCAGTTTTGCTACTTTATGGAAGGTACCAGAAAAAGGCTGCAAAGTTGTACAAGAGATGTTTTCTCTTTTTAGAACTGTCCGTGTTTATGGAACAGAAGAAGAAGAACTAGGAAGGTATCTAGTGCCGCAAATAAATATTGCTGTTCGACCTGGTAAGATTTTGATTGATGGCGCCACTTTGAAAGAGTTGGAAATCACGTGGTGGAGAGAAAGAATTGGATTTGTTGGACAGGAACCTAAGCTCTTCAGAATGGATATTAGTTCAAACATAAGATATGGATGCACTCGAGAGATTACGCAAGAGGATGTTGAATGGACTGCAAAGCAAGCTTATGCCCATGACTTCATCTCAGCACTTCCTAATGGCTATGAAACACTTGTTGATTATGATTTGTTAAAGTCCAAGCAATCTAAGAGGCGAAATCTGAAGGTCGCATCGATTTCCCGAGCCCACCCTCGCCAGAAAAGTAGTAGTCAGATGTGTTGTCGCAAAAGTGCATACGATGAACCTATCCTGCTTTTACGAGTGGCTTCGAAGCTTTTTTTGCAATCCCAATCAAGTTTGAGACGCCGATCTCCTTCAATGCAAATAGCAAAGGCTCTTTTATTCCAAGCGCTAGGCCCCACCGCGCTCTGTGAACCCTTGTCTTCCTGA 1320 0.4167 MALLLGGIQPQILTSLRHDHRKPCIGVCHGSVSFLRFCLEEAGGTSPKTLKSKIQLNPLLFGDFHTTFLNSVYLLRTECGCYSFPLECASLGSVLYNFGNIHVAEIKHFQIAAYEKSNNLFPAVVTSFSFETFHFACEICFNGIRGGCFGIANIILDISFFDNVTVGDLTSRLGADCQQVSRVIGNDLNLILRNVLQGTGALTYLLFLSWPLGLFTMLYISISFATLWKVPEKGCKVVQEMFSLFRTVRVYGTEEEELGRYLVPQINIAVRPGKILIDGATLKELEITWWRERIGFVGQEPKLFRMDISSNIRYGCTREITQEDVEWTAKQAYAHDFISALPNGYETLVDYDLLKSKQSKRRNLKVASISRAHPRQKSSSQMCCRKSAYDEPILLLRVASKLFLQSQSSLRRRSPSMQIAKALLFQALGPTALCEPLSS 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g1006 439 Pfam ABC transporter transmembrane region 156 261 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele53g1006 439 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 270 351 IPR027417 -
Lele53g1006 439 Gene3D ABC transporter type 1, transmembrane domain 151 270 IPR036640 GO:0005524|GO:0016020
Lele53g1006 439 Gene3D - 272 350 IPR027417 -
Lele53g1006 439 SUPERFAMILY ABC transporter transmembrane region 156 261 IPR036640 GO:0005524|GO:0016020
Lele53g1006 439 PANTHER ABC TRANSPORTER B FAMILY 128 261 - -
Lele53g1006 439 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 156 261 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g1006 Lele-ChrLele53 19506055 19513717 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g1006 273 374 Calmodulin-binding Proteins AT2G36910 36.275 2.65e-13 70.5