Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0990 ATGCAGATTCCGCGAAGACACCCATGTTGTGTGCCTCATTTAGAATTTGCAAATCTCGCAAAGAGAAACTTCAACTCAGTTGTGGGTCTCAAAGAAAAGCTCAGTTTCTTGTTGAGCAGAACCCAGAAATCTGTACCAGAGAAGAACATGAAGAAAGCAGTTCAATTAGTCTCTTTTCAATCCCTTGTTCTCTTTTCACTATTTATTCTACCAGAAACTGTAGTGGCAGATCCAAGAACAAAGACAGTGCAAATAATGTGTGGGAATCAAACAGAACACGATATCACAAACTTTGTCACAAATTTTGTTACAACCATGGATGATATCAGTGATCAGATGCGAAATCATGGGTATGGCACTGCAGTTTCAGGAAAAGGTCCTGATACTAACTATGGTCTTGCTCAGTGCTATGGAGATCTTTCTTTACTTGACTGTGTTCTATGTTATGCCGAGGCTCGCACAGTTCTTCCCAAGTGCTTCCCCCGCAATAGCGGTCGTATATACCTTGATGGTTGCTTTATGAGGGCTGAGAATTACAGCTTCTTTGATGAGTATAAAGGAGGAGGAGACAGGGTTGTGTGTGGAAACACGACCAGGAAAAGCTCGAGTTTTCGAGTAGCAGCGAAGCAGGCGGTTCTGAGTGCAGTTGAAGCTGCAATGTATAATAAAGGGTATGCAAGGGAGAAGGTTGCTGTATCAGGAGCAACAAATGAATCAGCTCATGTTCTGGCTAATTGTTGGAAAAGTTTGAACACGAGTTCTTGTAAAGCTTGTCTTGAAGATGCTTCTTCTTCAATATTGGGATGCTTGCCCTCAAGTTCATCAGGTAATGTAATTGTGCTAGTGGTTGCAATTATCAGTTCAGTGATTGTTTTCGTGGTTGCAATAGCCCTTGGGGTTTTTGTCTGGAAACAGAGATACATTAAAATGAAACGAAGAGGTTCAAATGATGTGGAGAAGTTAGCGAAGACCCTTCACCATAACAGCTTGAACTTCAAGTACTCGACCTTGGAGAGGGCAACCGACTCTTTCGGTGGAATTTTGCCTGATGGAAGAGAGATTGCAGTGAAGAGAGGGTATATGGCTCCAGAGTACCTAGCTCATGGTCAATTAACAGAGAAAGCAGATGTATATAGTTTCGGCGTGCTTCTGCTGGAAATAGTTACCGGGAGACAGAACAACAGAAGCAAAGCAACAGAATATTCAGACAGCCTAATTACAGTGATAGGACTTCTATGTACTCAAGAGATGCCTTCACTGAGACCAACTATGTCAAAAGCATTAGAAATGATAACTAAGGAGGAAGAGCAACTTCCAGCTCCCTCTAATCCACCCTTCATAGATGAAACCACAATGGAACTTCAAGACATATATGATGATCCACTCTTTCCTCTCAATGCTGCAGATTCAATTGCAACTATCTCCCACAGTGATTTTTTTCCCAGGTGA 1449 0.421 MQIPRRHPCCVPHLEFANLAKRNFNSVVGLKEKLSFLLSRTQKSVPEKNMKKAVQLVSFQSLVLFSLFILPETVVADPRTKTVQIMCGNQTEHDITNFVTNFVTTMDDISDQMRNHGYGTAVSGKGPDTNYGLAQCYGDLSLLDCVLCYAEARTVLPKCFPRNSGRIYLDGCFMRAENYSFFDEYKGGGDRVVCGNTTRKSSSFRVAAKQAVLSAVEAAMYNKGYAREKVAVSGATNESAHVLANCWKSLNTSSCKACLEDASSSILGCLPSSSSGNVIVLVVAIISSVIVFVVAIALGVFVWKQRYIKMKRRGSNDVEKLAKTLHHNSLNFKYSTLERATDSFGGILPDGREIAVKRGYMAPEYLAHGQLTEKADVYSFGVLLLEIVTGRQNNRSKATEYSDSLITVIGLLCTQEMPSLRPTMSKALEMITKEEEQLPAPSNPPFIDETTMELQDIYDDPLFPLNAADSIATISHSDFFPR 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0990 482 ProSiteProfiles Gnk2-homologous domain profile. 80 181 IPR002902 -
Lele53g0990 482 FunFam Cysteine-rich receptor-like protein kinase 2 80 181 - -
Lele53g0990 482 ProSiteProfiles Gnk2-homologous domain profile. 187 292 IPR002902 -
Lele53g0990 482 SUPERFAMILY Protein kinase-like (PK-like) 355 456 IPR011009 -
Lele53g0990 482 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 131 357 - -
Lele53g0990 482 Pfam Protein tyrosine and serine/threonine kinase 359 394 IPR001245 GO:0004672|GO:0006468
Lele53g0990 482 Gene3D - 191 282 IPR038408 -
Lele53g0990 482 Gene3D - 79 181 IPR038408 -
Lele53g0990 482 Gene3D Transferase(Phosphotransferase) domain 1 320 440 - -
Lele53g0990 482 Pfam Salt stress response/antifungal 91 179 IPR002902 -
Lele53g0990 482 Pfam Salt stress response/antifungal 198 273 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0990 Lele-ChrLele53 19393951 19399118 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0990 354 482 Receptor kinase-like Gene Family AT1G70520 50.299 2.42e-39 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele53g0990 PK_Tyr_Ser-Thr 4e-08 CL0016