Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0988 ATGGACACTACTGGTTCGGTTTTCTGTTTTCTGGGTTTGCTGATTCTGGCGTTGATAGAGATTTCTTCTGCTGCGCTTTCTCCTTCTGGGATAAATTATGAAGTTGTCGCTCTGATGGCCATAAAAAATGAATTACATGATCCCCACAATGTCCTGGAGAGTTGGGATATTAATTCTGTCGATCCTTGTAGCTGGAGGATGATTACTTGTACCCCGGATGGTTCCGTCTCTGCTTTAGCATTGCCTAGTCAGAACTTGTCTGGGAAGCTATCTCCTGGGATTGGAAATCTGACGAACTTGCAATGTGTGTTACTTCAAAACAATGCCATTTCTGGTTCAATTCCCACTGATATAGGAAAGCTGGAAAAACTTCAGACACTAGATCTTTCCAATAATGCATTTAGCGGAGAGATACCTAGTTCTCTGGGGAGCCTCAAGAACCTGAATTATCTGCGGTTGAACAATAACAGCCTTTCAGGATCCTGCCCTCAGTCTCTTAGCAACATTAAAGGTCTAACCCTTGTGGATCTCTCTTATAACAATCTGAGTGGTTCGTTGCCAAGAGTATCAGCAAGAACATTCGAGATTTTGGGAAACTCTTTGATTTGTGGTCCAAATGCTAACAATAACTGCTCTAATGTTCTGCCGGAGCCACTTTCCTTCCCACCAGATTCTTTAAGAGGCCAATCGGCATCTGGGACAAAAAGTCATCATGTTGCAGTTGCTTTTGGAGCAAGCTTTGGAGCTGCTTTTGTCATTGTGATTATTGCTGTGTTCTTTGTTTGGTTGCGTTATAGACACAACAAACAGATATTCTTTGATGTTAATGAGCAATATGACCCAGAGGTGCGCCTTGGCCATTTGAGAAGGTATACATTCAAAGAACTTAGAGCTGCAACAGATCATTTCAATTCAAAGCACATTCTCGGACGGGGTGGCTTTGGAATAGTCTACAAGGGGCGCTTCCATGATGGCTCTGTGGTAGCAGTTAAAAGGTTGAAGGACTATAATGCTGGTGGTGGTGAGATCCAATTTCAAACTGAAGTTGAGACCATAAGTTTGGCTGTTCACAGGAATCTCTTGAGACTTTGTGGGTTTTGCAGTACCGAAAACGAAAGGCTCCTTGTGTATCCATATATGCCTAATGGCAGTGTAGCCTCTCGATTAAAAGAATATTTATCTACAGGCCAGTCATCAGAAAAGACTGATGTGTTTGGTTTTGGGATCTTACTGCTTGAGCTGATCACAGGTCATAAGGCTTTGGATTTTGGACGAGCAGCAAACCAGAAAGGCGTAATGCTTGATTGGGTTAAGAAGCTCCATCAAGAAGGAAGATTGAGTCAAATGGTTGACAAAGATTTGAAGGGAAACTTTGATGCAAATGAACTGGAGGAAATGGTTCAGGTTGCACTGTTATGTACGCAATTTAATCCTCTGCACAGACCTAAGATGTCAGAAGTTTTGAAGATGTTGGAGGGAGATGGCTTGGCTGAGAGGTGGGAGGAAGCCTCACAGACGACAGAGACAAGGTTCAGGTCTTTTGAAAACCCTCCACAAAGGTACTCAGATTTTATAGAAGAATCTTCACTCATACTTGAAGCTATGGAGCTTTCTGGCCCTAGATGGACAACAAAGGCCATTAGATTTGCATTCTCATCAGAAAAGACTTTCACGCCCAGAAAGAAGCTTCTTTCGTTTAGTTTACTAGTTGCTCTTTATCTTGTAATCTTCCCTCTTCTCTTACCCAACAAATCCTTCTCAGTTTCTAAAGTTAAGGTTGTTCATCGTCCTCTGTCTTCTTCTTCTTCTTCTGGGAACAAAACTCAGGCAGCGAATGTATCTGGAACACAACATGCGACCCTTTTGAGAGATTCTATTGAGAACACTAAACATGCAAGCTTGCATGTCGGAGAAAAGAGTTTTCAGAAGAATACCCGTGAAGATAATCGTACGGTGGTCAATGTTCAGAGGAATTCATCTGAGATAGTCAAAGATAAATGCTTTTCGGTTGAACAAGACAGAAACACTGCGAATATAACAACATCACCGAAGAATTTCAGTTTTAGTTCTGAAAATCACCATGTGGGCAATTTCTCTCAGGGAAAGCATGAAGCAGATTCGAATGAGAAGAGTAATAATAATGCAAGTTTGATTCATCCGGAGAAGAAGATTGGTTTATATAAAGACTGTGATATCTTTGACGGAAAGTGGGTGAGAGATGAATCAAAACCACTTTATCCAGTTGGTTCTTGTTCAAACATCGACAAATCCTTCGATTGTCATCTTCATGGGAGACCAGATAGAGATTATATCAAGTGGAGATGGAAACCGAATGGCTGCGACATTCCAAGATTGAATGCTACTGATTTTCTCAAGAGGCTGCAAGGTCAGAGGCTGGTTTTTGTGGGGGATTCACTGAACAGGAACATGTGGGAATCAATGGTGTGTATTTTCCGACAGAGTATAAGGAACAAGAACAGAGTTTATGAAATCTCAGGAAGGACAGATTTCAAGAAGAAAGGTGTCTATTCCTTTAGATTTGAGGACTATAATTGTTCGGTGGACTTTATTGTGTCACCATTCATCGTGCGAGAATCAAGTTTCAGAGGCAAAAATGGGACCTTTGAGACATTAAGGTTGGATTTGATGGACAAGACAGCTAGCACGTACCATGATGCTGATATCATTGTCTTCAACACTGGCCATTGGTGGACCCATGAGAAAACATCTCGAGGAGAAGAGTATTATCAAGAAGGTAACCATGTACACCCAAAGATGGAAGTTTTGGATGCATATAGAAAGGCTTTGACCACATGGGCTCGATGGGTTGACCGAAACATCGATGCCAATCGAACTCAGGTTTTCTTCCGAGGATACTCACAATCCCATTTCAGTGGTGGGCAATGGAATTCAGGAGGACAGTGTCACAAAGAGGGCGAGCCGATATTCAACGAGACGTACTTGGAAAAATATCCGGCGAAAATGAGAGTGGTGGAGCAAGTGATACAGAAAATGATGATTCCAGTGAGTTATATGAACATAACAAGGCTTACAGATTACAGAAAAGATGGTCATCCTTCAATATACAGAATGAAATATGAAACAGAAGCAGAATTGAAATCTGCTGAGACATCTCAAGATTGTAGCCATTGGTGCTTGCCTGGAGTTCCTGATACTTGGAATGAATTGCTTTATGCTTCTCTCTTGCAACATGGAAAAGGTTCATGGAAAAGCTGA 3237 0.4171 MDTTGSVFCFLGLLILALIEISSAALSPSGINYEVVALMAIKNELHDPHNVLESWDINSVDPCSWRMITCTPDGSVSALALPSQNLSGKLSPGIGNLTNLQCVLLQNNAISGSIPTDIGKLEKLQTLDLSNNAFSGEIPSSLGSLKNLNYLRLNNNSLSGSCPQSLSNIKGLTLVDLSYNNLSGSLPRVSARTFEILGNSLICGPNANNNCSNVLPEPLSFPPDSLRGQSASGTKSHHVAVAFGASFGAAFVIVIIAVFFVWLRYRHNKQIFFDVNEQYDPEVRLGHLRRYTFKELRAATDHFNSKHILGRGGFGIVYKGRFHDGSVVAVKRLKDYNAGGGEIQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLKEYLSTGQSSEKTDVFGFGILLLELITGHKALDFGRAANQKGVMLDWVKKLHQEGRLSQMVDKDLKGNFDANELEEMVQVALLCTQFNPLHRPKMSEVLKMLEGDGLAERWEEASQTTETRFRSFENPPQRYSDFIEESSLILEAMELSGPRWTTKAIRFAFSSEKTFTPRKKLLSFSLLVALYLVIFPLLLPNKSFSVSKVKVVHRPLSSSSSSGNKTQAANVSGTQHATLLRDSIENTKHASLHVGEKSFQKNTREDNRTVVNVQRNSSEIVKDKCFSVEQDRNTANITTSPKNFSFSSENHHVGNFSQGKHEADSNEKSNNNASLIHPEKKIGLYKDCDIFDGKWVRDESKPLYPVGSCSNIDKSFDCHLHGRPDRDYIKWRWKPNGCDIPRLNATDFLKRLQGQRLVFVGDSLNRNMWESMVCIFRQSIRNKNRVYEISGRTDFKKKGVYSFRFEDYNCSVDFIVSPFIVRESSFRGKNGTFETLRLDLMDKTASTYHDADIIVFNTGHWWTHEKTSRGEEYYQEGNHVHPKMEVLDAYRKALTTWARWVDRNIDANRTQVFFRGYSQSHFSGGQWNSGGQCHKEGEPIFNETYLEKYPAKMRVVEQVIQKMMIPVSYMNITRLTDYRKDGHPSIYRMKYETEAELKSAETSQDCSHWCLPGVPDTWNELLYASLLQHGKGSWKS 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0988 1078 FunFam Somatic embryogenesis receptor kinase 1 272 379 - -
Lele53g0988 1078 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 782 1066 IPR026057 GO:0016740
Lele53g0988 1078 ProSiteProfiles Protein kinase domain profile. 303 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele53g0988 1078 Pfam Leucine rich repeat N-terminal domain 32 70 IPR013210 -
Lele53g0988 1078 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 10 502 - -
Lele53g0988 1078 Pfam Protein kinase domain 304 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele53g0988 1078 Gene3D Phosphorylase Kinase; domain 1 272 379 - -
Lele53g0988 1078 MobiDBLite consensus disorder prediction 679 717 - -
Lele53g0988 1078 FunFam Putative LRR receptor-like serine/threonine-protein kinase 31 213 - -
Lele53g0988 1078 SUPERFAMILY Protein kinase-like (PK-like) 287 499 IPR011009 -
Lele53g0988 1078 Gene3D Ribonuclease Inhibitor 31 213 IPR032675 -
Lele53g0988 1078 SUPERFAMILY L domain-like 32 199 - -
Lele53g0988 1078 Pfam PMR5 N terminal Domain 728 781 IPR025846 -
Lele53g0988 1078 ProSitePatterns Protein kinases ATP-binding region signature. 309 331 IPR017441 GO:0005524
Lele53g0988 1078 MobiDBLite consensus disorder prediction 679 696 - -
Lele53g0988 1078 Gene3D Transferase(Phosphotransferase) domain 1 389 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0988 Lele-ChrLele53 19350630 19360850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0988 383 541 Receptor kinase-like Gene Family AT5G16000 63.473 3.90e-58 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lele53g0988 PC-Esterase 9.8e-100 CL0264