Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele53g0983 | ATGGTGATTGTAGCATCACTACCTGGACGCAACCTCTTCTCTTCCTTACCTTCGACGCCACCACCCTCCGACCCCACCGTCAACACCGCCACTCCTTCCCCTCCGATCCCAATTCCTAAATACCCACCTCCTCGCAGATTCCTTAAGTCCCAAAAAAACCCTCCTGAACCCTCAAAGCCCACTTCGAATCCTGCCCTGAAGCACCATCGCAATTCCAAGTACTACAAACCCGTCAAAGATGGCGTTATTACATCTGAAGGTGATCGCTCCGTCGTCATTGGCGAGTCCGGAGTGTCCTATCTTCTTCCCGGAGCCCCATTCGAATTCCAGTTTAGTTATTCCGAGACGCCTAAGGTAAAGCCACTGGCGATTCGGGAGCCGGCGTTCTTGCCGTTCGCGCCGCCCACAATGCCGAGGCCTTGGACTGGTAAAGCACCATTGAAGAGCTCAAAGAAGAAAATCCCACTCTTCGATTCTTTCAATCCTCCCCTTCCGGGAACGAAAGGGGTGAAGCATGTTGAAATGCCAGGGCCGTTTCCAGCTGGGAAGTATCCACAGGAGGGGAAGACGAGGGAGGAGATACTTGGGGAGCCTTTGAAGAAGTGGGAAATAAGAATGCTTGTTAAACCCGTGTTGGGTGAAAATCGCCAGGTTAATCTCGGAAGGGATGGATTAACACATAACATGTTGGAGTTAATACATTCACATTGGAAGCGAGCCCGTGTTTGTAAAGTTCGTTGCAAAGGTGTCCCAACCGTAGATATGGATAACGTTTGCTATCATCTTGAGGAGAAGACTGGGGGTAAAATAATTCATCGGGTTGGTGGCGTGGTTTATCTTTTCCGTGGGAGAAATTACAACTATCGTACTCGTCCTCAGTATCCATTGATGCTCTGGAAGCCAGCTGCTCCAGTTTACCCAAAACTCATCCAAGAAGCTCCGGAAGGATTAACAAAAGCTGAAGCTGACGAATTCCGTAAGAAAGGAAAAAGGCTGCTAACAATATGTAAATTAGCTAAAAATGGAGTATATGTTTCCCTTGTGAAAGATGTAAGACATGCTTTTGAAGGAAGTCCATTGGCGAAAATTGACTGCAAGGGGTTGGAACCCAGTGATTACAAGAAAATAGGAGCCAAGCTTAAGGAATTGGTTCCTTGTGTGCTGCTGTCCTTTGATGATGAACAGATATTAATGTGGAGGGGGAAAGATTGGAAATCTATGTACCCTCAAGCTCCTCCAGTTCTAAGCCTTCCTGAAGTTGGTGTTGCAACGAACTTGCACAATTCAGGTGAGACTGAGGATGATCAAAATAAGGATGATAGAAACATGATGCTGTCGAGCCCGAAAATGACATCGCTGTGGAAGCGTGCGATAGAGTCGAGCAAAGCGCTGTTGTTGGATGAGATTATTGTTGATCCTGATGCTCTCTTGGAGAAGGTAGAGGAGTTTGAAGTTGTTTCGCAGGCCACCGAACACTCCTCACCGGCACTCATATTTGCCAGCGAAGATGGTGATGCTGCTACTAAGGGCTCACTTGCTGACTTTGAAGAAGACTACGGTTATCCTAGTGATGGCTTCGCTACCGAGGATGACGATGACGATGACGAAGATTATCTGTATGACAACAGTGATGAATATAAAGAAGATGAATCGAATGCTGAGGCGGGTTCATCAGCCCCACCTGGATCGTTACCTATTGATTTAATTGCTGACAAGCTCAGAATAAGACGAGACGAATAA | 1740 | 0.4713 | MVIVASLPGRNLFSSLPSTPPPSDPTVNTATPSPPIPIPKYPPPRRFLKSQKNPPEPSKPTSNPALKHHRNSKYYKPVKDGVITSEGDRSVVIGESGVSYLLPGAPFEFQFSYSETPKVKPLAIREPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNPPLPGTKGVKHVEMPGPFPAGKYPQEGKTREEILGEPLKKWEIRMLVKPVLGENRQVNLGRDGLTHNMLELIHSHWKRARVCKVRCKGVPTVDMDNVCYHLEEKTGGKIIHRVGGVVYLFRGRNYNYRTRPQYPLMLWKPAAPVYPKLIQEAPEGLTKAEADEFRKKGKRLLTICKLAKNGVYVSLVKDVRHAFEGSPLAKIDCKGLEPSDYKKIGAKLKELVPCVLLSFDDEQILMWRGKDWKSMYPQAPPVLSLPEVGVATNLHNSGETEDDQNKDDRNMMLSSPKMTSLWKRAIESSKALLLDEIIVDPDALLEKVEEFEVVSQATEHSSPALIFASEDGDAATKGSLADFEEDYGYPSDGFATEDDDDDDEDYLYDNSDEYKEDESNAEAGSSAPPGSLPIDLIADKLRIRRDE | 579 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele53g0983 | 579 | ProSiteProfiles | CRM domain profile. | 315 | 411 | IPR001890 | GO:0003723 | |
Lele53g0983 | 579 | FunFam | CRS2-associated factor 1, chloroplastic | 316 | 411 | - | - | |
Lele53g0983 | 579 | MobiDBLite | consensus disorder prediction | 523 | 544 | - | - | |
Lele53g0983 | 579 | ProSiteProfiles | CRM domain profile. | 197 | 293 | IPR001890 | GO:0003723 | |
Lele53g0983 | 579 | Gene3D | - | 317 | 411 | IPR035920 | - | |
Lele53g0983 | 579 | MobiDBLite | consensus disorder prediction | 18 | 50 | - | - | |
Lele53g0983 | 579 | Gene3D | - | 198 | 294 | IPR035920 | - | |
Lele53g0983 | 579 | PANTHER | CRS2-ASSOCIATED FACTOR 1, CHLOROPLASTIC | 52 | 572 | IPR044599 | GO:0000373 | |
Lele53g0983 | 579 | Pfam | CRS1 / YhbY (CRM) domain | 317 | 400 | IPR001890 | GO:0003723 | |
Lele53g0983 | 579 | Pfam | CRS1 / YhbY (CRM) domain | 201 | 282 | IPR001890 | GO:0003723 | |
Lele53g0983 | 579 | FunFam | CRS2-associated factor 1, chloroplastic | 198 | 293 | - | - | |
Lele53g0983 | 579 | SUPERFAMILY | YhbY-like | 198 | 292 | IPR035920 | - | |
Lele53g0983 | 579 | SMART | CRS1_YhbY_2 | 317 | 400 | IPR001890 | GO:0003723 | |
Lele53g0983 | 579 | SMART | CRS1_YhbY_2 | 199 | 282 | IPR001890 | GO:0003723 | |
Lele53g0983 | 579 | SUPERFAMILY | YhbY-like | 317 | 408 | IPR035920 | - | |
Lele53g0983 | 579 | MobiDBLite | consensus disorder prediction | 515 | 565 | - | - | |
Lele53g0983 | 579 | MobiDBLite | consensus disorder prediction | 1 | 73 | - | - | |
Lele53g0983 | 579 | MobiDBLite | consensus disorder prediction | 425 | 444 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele53g0983 | Lele-ChrLele53 | 19313800 | 19317108 | Dispersed/Wgd |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele53g0983 | 53 | 19313800 | 19317108 | Lele55g0015 | 55 | 131538 | 136985 | hybridization | |
Lele53g0983 | 53 | 19313800 | 19317108 | Lele56g0477 | 56 | 3537431 | 3545597 | hybridization |