Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0981 ATGTCAACACTCAACGAGCTTCATCTTCAAGAACGGATATGTTACGTGAAATGTGGATTCTGCACCACCATGTTACTGGTCACTGTTCCATGCAGCAGTTTATCAATGGAGGTGACTGTAAGGTGTGGGAACTGCACAAACCTTCTCTCTATGAATATGATGAAAGCTTCTTTTGTCCCTTTTCAACTCTTTCCTTCTGTTACTAATTGTCTTGATCAGCCCAAAGAAGGAAGTCCAGTAGAAAATACATACAAGAGTACTTGTTCTGATAGTGGCGAAGATGATGCAATTAATGAACGGCCAGGGAAAAGACAAAAAACACCATCGGCTTATAATCGCTTCATCAGAGAAGAGATCAGAAGGCTGAAGACTGAGAACCCAGACATGGTCCACAAGGAAGCTTTCAGAACAGCTGCCAAAAATTGGGCCAATTTCCCTCAAGCTCAATCTAAAGGAGATGAAGAGAGCTGTAGCCAATCAGAGCAACGGGAAGATGCTGAGGTAAAATCATAG 513 0.425 MSTLNELHLQERICYVKCGFCTTMLLVTVPCSSLSMEVTVRCGNCTNLLSMNMMKASFVPFQLFPSVTNCLDQPKEGSPVENTYKSTCSDSGEDDAINERPGKRQKTPSAYNRFIREEIRRLKTENPDMVHKEAFRTAAKNWANFPQAQSKGDEESCSQSEQREDAEVKS 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0981 170 Gene3D High mobility group box domain 91 170 IPR036910 -
Lele53g0981 170 MobiDBLite consensus disorder prediction 75 109 - -
Lele53g0981 170 MobiDBLite consensus disorder prediction 142 170 - -
Lele53g0981 170 PANTHER PROTEIN YABBY 6-RELATED 1 161 IPR006780 GO:0007275
Lele53g0981 170 MobiDBLite consensus disorder prediction 75 91 - -
Lele53g0981 170 MobiDBLite consensus disorder prediction 156 170 - -
Lele53g0981 170 SUPERFAMILY HMG-box 98 149 IPR036910 -
Lele53g0981 170 Pfam YABBY protein 9 149 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0981 Lele-ChrLele53 19306018 19307352 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0981 2 151 C2C2-YABBY Transcription Factor Family AT1G23420 50.568 2.15e-48 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Lele53g0981 YABBY 3.6e-46 CL0114