Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0972 ATGAATACTCAAACAAGTGGCGTTGACCAGGATTTTAGAACTAAAGATGGTTATGCTGATTTCGAAAGTGTTAGCCTCCTTAATGTGTTAGATTTGCAGATAGGAAGCTTTGATGCTGGTTATGGAAGTTCCATCATGTCACGTCTGGTGGGGCCCAAAAAAGCAAGTGAAATGTGGGTTCTCACGAGGTTTTATACTGCCAATGAAGCAGATAAAATGGGGCTTGTAAACACTGTTGTACCTGAGATTGGTGGAAATGCAACACTTATATTTTATGGCACTGAGGAAGCTAACGAGGGAAAGACAGCATTCATGCAACATAGAGCCCCTGATTTTTCCAAGTTTCACAGAAGACCTTGA 360 0.4139 MNTQTSGVDQDFRTKDGYADFESVSLLNVLDLQIGSFDAGYGSSIMSRLVGPKKASEMWVLTRFYTANEADKMGLVNTVVPEIGGNATLIFYGTEEANEGKTAFMQHRAPDFSKFHRRP 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0972 119 Pfam Enoyl-CoA hydratase/isomerase 31 82 IPR001753 GO:0003824
Lele53g0972 119 PANTHER NUCLEOSIDE-DIPHOSPHATE-SUGAR EPIMERASE 33 81 - -
Lele53g0972 119 Gene3D - 83 107 IPR014748 -
Lele53g0972 119 Gene3D - 19 82 - -
Lele53g0972 119 SUPERFAMILY ClpP/crotonase 32 113 IPR029045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0972 Lele-ChrLele53 19264716 19267112 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0972 5 119 Acyl Lipid Metabolism Gene Families AT1G60550 43.564 1.33e-45 148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0972 53 19264716 19267112 Lele49g0548 49 3310418 3312677 CCT
Lele53g0972 53 19264716 19267112 Lele50g0579 50 3521317 3523590 CCT
Lele53g0972 53 19264716 19267112 Lele51g0568 51 3399193 3401445 CCT
Lele53g0972 53 19264716 19267112 Lele52g0577 52 3606465 3608737 CCT
Lele53g0972 53 19264716 19267112 Lele56g0486 56 3586911 3590271 hybridization