Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0960 ATGGAATACGTTAGCGTTCACGGTAGACGCCACTGGAACCGCATCTCCAAAGTCACTGGAAGGGTACCTGGAAGAACAGACAACCAAATAAAGAATCATTGGAACACTCATTTGTGCAAGAAACTTGGTATCACTAAACAGACCAGAAAAACTGTTAAGATAAAGGAATCCTTGGAACATAGGGCTTTGCGCTCAGAAGAGACTCAAAATGTTCACATGCCTTCGAGTTCTTTGCCTATTATTCCACTCGCTCTCAACAATAAAGCTGAAGAAGCTGGCCAAGGAAGCTATGAGAACAACAATCCCATGGAAATCATTGATGAAGCACAACGTTGTTGGCTTCCAACAGAAAATCTTCGCATGGACCAAACTTTTATGTTGGATGATGATCATCATACTTTTGTTCTACATAGTCCTCCTAGGTTAATGGAATTCTTTGATGGATTTGATATAATGTAG 459 0.4052 MEYVSVHGRRHWNRISKVTGRVPGRTDNQIKNHWNTHLCKKLGITKQTRKTVKIKESLEHRALRSEETQNVHMPSSSLPIIPLALNNKAEEAGQGSYENNNPMEIIDEAQRCWLPTENLRMDQTFMLDDDHHTFVLHSPPRLMEFFDGFDIM 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0960 152 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 42 IPR017930 -
Lele53g0960 152 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 13 86 - -
Lele53g0960 152 ProSiteProfiles Myb-like domain profile. 1 38 IPR001005 -
Lele53g0960 152 Gene3D - 1 71 - -
Lele53g0960 152 SUPERFAMILY Homeodomain-like 2 42 IPR009057 -
Lele53g0960 152 CDD SANT 2 38 IPR001005 -
Lele53g0960 152 Pfam Myb-like DNA-binding domain 2 38 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0960 Lele-ChrLele53 19195031 19198764 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0960 13 69 MYB Transcription Factor Family AT5G14750 52.459 1.28e-12 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele53g0960 Myb_DNA-binding 2.7e-08 CL0123