LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele53g0950	ATGGATCTGGAAGTTGGAGTTTCTAAAAGTTATGTTGCTAAGAAAGAATCGTGGAAGACGGTTCTAACTTTGGCATACCAGAGCCTCGGAGTTGTCTATGGAGATTTAAGCACTTCACCGTTATACGTATACAGGAGCACATTTGCTGAAGATATTGGACACACACAGAGCAACGAAGAGATTTATGGCGTCTTGTCTTTGGTTTTCTGGACTTTCACTTTGGTCCCTTTGATAAAATACGTGTTCATCGTTCTCAGAGCTGATGATAATGGCGAAGGGGGTACATTTGCTCTGTACTCCTTGCTGTGTCGACACGCCCGAGTCAACTCAATGCCCAATAGCCAGGTGGCGGATGAGGAGCTCTCTGAGTATAAGAAGGATGGTTTCTGTATGGCCCCAGAGAGAAGCTTTGCATCGAGATTGAAGGCCACTTTGGAGAAGCACAAGGTTTTGCAGAGGATTTTGCTTGTTCTTGCTTTGATCGGAACTTGCATGGTGATTGGTGATGGGGTCCTCACACCTGCTCTTTCTGTTTTCTCTGCGGTTTCTGGCCTTGAGCTTTCTATGTCCAAGGAACATCACAGATATGTAGAAGTCCCAGCTGCATGCGTTATACTTATAATCTTGTTTGCCTTACAACATTTCGGCACACACAGGGTTGGCTTCTTGTTTGCTCCTATAGTAATCACATGGCTTCTCTGTATCAGTGCGATCGGTGTATATAATATATTCTACTGGAATCCTCATGTGTATAAAGCCCTCTCTCCTTATTATGTTTTCCAATTTTTAAGGAAAACACAAAAGGGAGGTTGGATGTCTCTTGGTGGAATTTTGCTGTGCATAACAGGATCGGAAGCCATGTTTGCTGATCTCGGGCACTTTTCACAGTTATCAATCAAGATTGCTTTCACAGCTGTGGTATATCCATCTTTAATTCTGGCGTATATGGGCCAAGCCGCTTATCTTTCTAGACACCATGACATTGCACATGATTATCACTTCACATTTTACGTATCTGTACCAGAGAAATTAAGATGGCCCGTTCTGGTGATAGCCATACTCGCTGCAGTTGTTGGAAGCCAAGCCATCATCACTGGAACTTTCTCAATCATCAAGCAGTGTTCTTCATTGAGTTGCTTCCCAAGAGTCAAAGTTATGCACACATCATCAAAAATTCATGGTCAAATATATATCCCTGAGATCAACTGGCTACTGATGTTCTTGTGCTTGGCCGTCACAATTGGTTTCAGAGACACGAAGCGTTTAGGGAATGCATCAGGTCTGGCAGTTATTACGGTGATGCTGGTCACTACATGTTTGATGTCTCTGGTGATTGTACTATGCTGGCACCAGAATGTTTTTCTTGCGCTCGGATTTGTTTTCGTCTTTGGGACGGTTGAGGCTCTCTTCTTCTCGGCTTCTCTTGTCAAGTTCCTGGAAGGAGCATGGGTGCCAATTGCATTGGCGTTTGTATTCCTTATTGTCATGTATATTTGGCACTATGGCACTCTCAAAAGGTATGAATTTGATGTTCAAAACAAGGTCTCTATCAACTGGCTGCTTAGCCTCGGCCCCAGCATAGGTATTGTCAGAGTCCGTGGCATCGGCCTTATCCACACAGAACTCGTATCTGGAATTCCTGCAATCTTCTCCCACTTTGTGACCAACCTGCCGGCATTCCACCAAGTTGTGGTCTTCCTCTGCATCAAACATGTCCCGGTTCCACATGTTAGACCTGAGGAACGTTTCCTGGTGGGCCGAATAGGCCCAAGAAACTTCAGACTTTACCGGTGCATTGTGCGATATGGATACCGTGATGTCCACAAGGATGACATCGAGTTTGAGAAGGACCTTGTGTGCAGCATAGCGGAGATGATGCGAACCGACTCCGAAAGATCCAATGATGCTGCAAACAAAGAGGCTGAAAAAGACGACAAAATGACAGTTGTTGGAACATGTCCTTCCCACCCCATTTTGATGAGCGATGAAGATACATTGGATAATGACAGCAGTAACGGTAGCTTAGAGTCAGCCGGAACATTGACAGAGTTCAAGGAAATAAGGTCAGCGAAAGCAATCCAACCGAAGAAAAGGGTGAGGTTCGTCGTACCGGAAACTCCAAAGATCGATAAGGAGGCTAAGGAAGAGTTGGAGGAACTAATGGAAGCAAGGGAATCTGGGGTAGCCTACATTATGGGGCACTCTTATATGAGAGCAAAACCAGGATCTAGTTTGATAAAGAAGCTGGTGATTAATTTTGGGTATGAATTCTTGAGAAGAAATAGCAGATCGACTTCCTTTGTAGATACCGTACCTCATGCATCATCTTTGGAAGTGGGGATGATGTACCAAGTTTAA	2358	0.4449	MDLEVGVSKSYVAKKESWKTVLTLAYQSLGVVYGDLSTSPLYVYRSTFAEDIGHTQSNEEIYGVLSLVFWTFTLVPLIKYVFIVLRADDNGEGGTFALYSLLCRHARVNSMPNSQVADEELSEYKKDGFCMAPERSFASRLKATLEKHKVLQRILLVLALIGTCMVIGDGVLTPALSVFSAVSGLELSMSKEHHRYVEVPAACVILIILFALQHFGTHRVGFLFAPIVITWLLCISAIGVYNIFYWNPHVYKALSPYYVFQFLRKTQKGGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFTAVVYPSLILAYMGQAAYLSRHHDIAHDYHFTFYVSVPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSSLSCFPRVKVMHTSSKIHGQIYIPEINWLLMFLCLAVTIGFRDTKRLGNASGLAVITVMLVTTCLMSLVIVLCWHQNVFLALGFVFVFGTVEALFFSASLVKFLEGAWVPIALAFVFLIVMYIWHYGTLKRYEFDVQNKVSINWLLSLGPSIGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKHVPVPHVRPEERFLVGRIGPRNFRLYRCIVRYGYRDVHKDDIEFEKDLVCSIAEMMRTDSERSNDAANKEAEKDDKMTVVGTCPSHPILMSDEDTLDNDSSNGSLESAGTLTEFKEIRSAKAIQPKKRVRFVVPETPKIDKEAKEELEELMEARESGVAYIMGHSYMRAKPGSSLIKKLVINFGYEFLRRNSRSTSFVDTVPHASSLEVGMMYQV	785

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele53g0950	785	Pfam	K+ potassium transporter	26	606	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Lele53g0950	785	TIGRFAM	kup: potassium uptake protein	24	785	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Lele53g0950	785	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	13	784	IPR003855	GO:0015079\|GO:0016020\|GO:0071805

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele53g0950	Lele-ChrLele53	19108756	19112780	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele53g0950	1	785	Inorganic Solute Cotransporters	AT1G70300	75.285	0.0	1216