Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0949 ATGGCATCAAGGTCATATGCTAATCTCCTAGACTTAGCAAGTGGAGACTTATTGGCTAATCCTCACACCCCAAGAACTCTTCCAAGGATTGTTACAGTTCCAGGAATTATTTCAGATCTGGATCGTCAAGGTTCTAATGATGGGGATTCAGATGTCAGCTCTTCTGGCTGTCGAGAGCGGAAAATTATTGTGGCAAACATGCTACCATTGCAGGCTAAAAGGGACCCACGAACTTCTAAATGGTGCTTTAGTTTGGATGAGGATTCACTTTTATTACAGCTGAAAGATGGGTTTTCTTCTGATACTGAGGTGATCTATGTGGGGTCCCTCAAGGTTGAAATAGAGTCCAGCGAGCAGGAAGAGGTTGCTGAGAAATTAATGGACAACTTCAATTGCGTGCCTACTTTTCTACCTCATGATCTCCAGAAAAAGTTTTATCTTGGATTTTGTAAGCAGCAGCTGTGGCCTCTCTTTCATTATATGCTACCTGTGTGCCCAGATCATGGTGATCGCTTTGACCGCACGCATTGGCAGGCTTATGTTTCTGCTAACAAAATATTTGCAGATAAGGTTATGGAAATAATTAATCCTGATGATGATTTTGTGTGGGTTCATGACTATCACTTGATGGTGTTGCCTACTTTTCTGAGGAAGAAATTTAATCGAGTTAAACTTGGTTTCTTCCTTCATAGTCCTTTCCCTTCATCTGAAATTTACCGAACCTTGCCAGTACGAGATGAAATTCTTAGGGGATTGTTGAATTCTGACTTAATTGGTTTTCACACATTTGATTATGCTCGCCACTTTCTCTCTTGCTGCAGTAGAATGCTGGGTCTGGACTATGAATCTAAACGGGGACATATAGGACTTGATTATTTTGGCCGCACTATATTTATCAAGATTTTGCCTGTAGGCATTCACATTGGTAGGCTTGAATCTGTTTTAGATCTTTCTTCTACGTCTGCTAAAATAAAAGAAATCCAGGAAGAGTTTAAGGGTAGGAGGGTGATTCTTGGTGTTGATGATATGGACATTTTCAAGGGCATCAGCTTGAAACTACTAGCACTAGAGCAGCTGCTGCATCAGCATCCTGATTTGTTGGGCAAAATTGTACTAGTTCAAATTGTGAATCCTGCTAGGGGTTCTGGGAAGGATGTTCAGGAAGCAAAGAAGGAAACATATTTAATTGCCCAGAGGATCAATGATACTTATGGTTCACCTCATTATCAACCTGTTATTCTCATCCATCGTCCTGTTCCTCGTTTTGAGAAGAGTGCCTATTATGCGATAGCAGAATGTTGTATTGTCAATGCTGTGAGGGATGGCATGAACTTGGTCCCTTACAAATACGTTGTTTGCAGACAAGGAACTTCAAAACTGGATCAAGCATTGGGTAGAGAAAATGATGCTCCTCGTACAAGCATGCTTGTTGTATCAGAATTTATTGGCTGTTCCCCTTCCTTGAGTGGAGCAATTAGGGTTAACCCCTGGGATATAGATGCTGTTGCTGAAGCTTTGAATTTGGCCATTACAATGCATGATTCAGAGAAGAAATTGCGGCATGAGAAGCACTATCGGTATGTCAACTCCCATGATGTGGCTTATTGGGCACGCAGTTTTATGCTGGATTTGGAGAGAGCATGCAAAGATCATTACACCAAAAGGTGCTGGGGAATTGGTCTAGGCCTAGGGTTCAGAGTTGTTTCTCTTAATCCCGGTTTTAGGAAGTTGTCTGTTGATCACATTGTTTCAGCATACAAGAGAACCAAAAGAAGGACCATATTTCTTGATTATGATGGGACTGTTGTACCAAAATCTTCCATAAATAAAATCCCCAGCCCTGAAGTCATATCTGTTTTGAATACTTTGTGTAATGATCCCAAGAACACCGTGTTCATTGTTAGTGGGAGGGGAAGAGATTCGTTGAGTGATTGGTTTGCTTCATGCAAATTGCTGGGACTTGCTGCTGAACATGGGTACTTCTTAAGGTGGAGTAGTTCCTCCCAATGGGAAACAAGTAACCTGTGTGCTGACCTTGATTGGAAAAATGTCGTGGAACCCATAATGAGGTTATACATAGAAGCAACTGATGGATCTAATATTGAAATTAAGGAAAGTGCATTGGTGTGGCATCATCAAGATGCAGACCCTGATTTTGGTTCTTGCCAAGCCAAAGAATTGTTAAATCACCTTGAAAGCGTGCTTGCTAATGAACCGGCTGTTGTTAAGAGGGGGCAACATATTGTTGAAGTTAAGCCACAGGGAGTAAGCAAGGGTTTGGTAGCTGAAAAGGTTCTTATGACTATGGTCAATGATGGGGATCCGCCAGATTTTGTTTTGTGCATTGGAGATGATAGGTCTGATGAAGACATGTTTGAGAGCTTACTAAGGACAATCTCTTGTCCATCATTGCTAGTTGCTCCAGAGATCTTTGCCTGCACCGTGGGCCAGAAGCCTAGCAAGGCCAAGTATTATCTTGACGATGCTGCTGATGTGGTAAAATTGCTTCAGGGCCTTGGTACTTCATCAAATCCAAAGCCTAGGCATTTAGCCCATTTCCAGGTTTCTTTTGAGAGCACAGTTTGA 2586 0.4188 MASRSYANLLDLASGDLLANPHTPRTLPRIVTVPGIISDLDRQGSNDGDSDVSSSGCRERKIIVANMLPLQAKRDPRTSKWCFSLDEDSLLLQLKDGFSSDTEVIYVGSLKVEIESSEQEEVAEKLMDNFNCVPTFLPHDLQKKFYLGFCKQQLWPLFHYMLPVCPDHGDRFDRTHWQAYVSANKIFADKVMEIINPDDDFVWVHDYHLMVLPTFLRKKFNRVKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNSDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTIFIKILPVGIHIGRLESVLDLSSTSAKIKEIQEEFKGRRVILGVDDMDIFKGISLKLLALEQLLHQHPDLLGKIVLVQIVNPARGSGKDVQEAKKETYLIAQRINDTYGSPHYQPVILIHRPVPRFEKSAYYAIAECCIVNAVRDGMNLVPYKYVVCRQGTSKLDQALGRENDAPRTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVAEALNLAITMHDSEKKLRHEKHYRYVNSHDVAYWARSFMLDLERACKDHYTKRCWGIGLGLGFRVVSLNPGFRKLSVDHIVSAYKRTKRRTIFLDYDGTVVPKSSINKIPSPEVISVLNTLCNDPKNTVFIVSGRGRDSLSDWFASCKLLGLAAEHGYFLRWSSSSQWETSNLCADLDWKNVVEPIMRLYIEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLNHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLMTMVNDGDPPDFVLCIGDDRSDEDMFESLLRTISCPSLLVAPEIFACTVGQKPSKAKYYLDDAADVVKLLQGLGTSSNPKPRHLAHFQVSFESTV 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0949 861 Gene3D Glycogen Phosphorylase B; 314 530 - -
Lele53g0949 861 TIGRFAM T6PP: trehalose-phosphatase 590 838 IPR003337 GO:0003824|GO:0005992
Lele53g0949 861 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 30 840 IPR001830 GO:0003824|GO:0005992
Lele53g0949 861 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 591 708 - -
Lele53g0949 861 Gene3D Glycogen Phosphorylase B; 54 313 - -
Lele53g0949 861 FunFam Trehalose-6-phosphate synthase 2 675 754 - -
Lele53g0949 861 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 53 312 - -
Lele53g0949 861 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 549 - -
Lele53g0949 861 SUPERFAMILY HAD-like 592 839 IPR036412 -
Lele53g0949 861 CDD HAD_TPP 594 834 - -
Lele53g0949 861 CDD GT20_TPS 60 545 IPR001830 GO:0003824|GO:0005992
Lele53g0949 861 FunFam Alpha,alpha-trehalose-phosphate synthase 314 529 - -
Lele53g0949 861 Pfam Trehalose-phosphatase 595 828 IPR003337 GO:0003824|GO:0005992
Lele53g0949 861 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 721 852 - -
Lele53g0949 861 Pfam Glycosyltransferase family 20 60 545 IPR001830 GO:0003824|GO:0005992
Lele53g0949 861 Gene3D - 592 708 IPR023214 -
Lele53g0949 861 Gene3D - 721 852 IPR023214 -
Lele53g0949 861 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 594 795 IPR006379 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0949 Lele-ChrLele53 19089395 19092190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0949 1 861 Trehalose Biosynthesis Gene Families AT1G23870 73.587 0.0 1359