Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0947 ATGGGTAGGAACCTGTTCGTCTTGGGTCTTACGGTTCTGGTTTTATTTGCCGGCGTCACATCCGCAGCTTCTACTACTTCCCCTGCAAAGATTGTTAGTGGATTTCTCTCAAATGCTGTGCCTGCTTTCACGAAATGGCTTTGGTCACTCAAAGCTACGACCAAAACAGCGGTTTCTGGCCGGCAGATGATGAAGTTTGAGGGTGGATACACTGTGGAGACTGTGTTTGATGGAAGCAAGCTTGGAATCGAGCCTTATGCTGTTGAGCTGCTACCCAATGGAGAGCTTCTGATTCTAGATTCAGCTAATAGTAACCTTTACAGGATTTCTTCCTCACTTTCTCTGTATAGTAGACCGAGGCTGATAGCAGGATCTGCTGAAGGATACTCTGGACATGTTGATGGGAAGGTCAGGGAGGCCAGGATGAACCACCCAAAGGGAATAACAGTTGATGATCGAGGAAATATCTACGTGGCAGATACTTTGAATATGGCAATTAGGAAAATCAGCGATTCAGGGGTCACAACAATTGCTGGAGGAAAATGGAGCCGTGGGGGAGGCCATGTTGATGGGCCAAGTGAAGAAGCTAAATTTTCTAATGACTTTGATGTGGTTTATGTCGGAAGTAGCTGTTCTCTTCTTGTCATAGACAGAGGAAACCAAGCCATCAGAGAGATTCAGCTCCATTTTGATGACTGTGCTTATCAATATGGAAGTGGGTTTCCACTAGGGATTGCAATGCTGGTTGGGGCTGGCTTCTTTGGCTATATGTTGGCATTGGTGCAACGAAGGCTTGGTACAATTGTAGCATCCCAGAATGATCAAAGTCGAACAATGGCCGGAATTTCTCCAAGTCCATATAAGAAGCCCTTGAAATCTGTCAGGCCTCCTTTAATTCCATCTGAAAACGAACCTGAGAAGCAAGAAGAGGGTTTCTTTGGATCTCTGGGGAAGCTTCTTGCCAATGCTGGGGCATCAATGGTGGAGATTATAGGAGGATTATTTCCTGGTTTTAGAAAAAAACCAGCAATCTATTATTTTCAGAGCCAGCCATTGCTCCATCAACCGCAAAAGCACACAAGTGCTTGGCCTGTGCAGGAAAGTTTCGTAATTCCTGATGAAGATGAACCGCCTTCAATTGACACTAGAGCTCCGACCCCTCGAAAAACCTATCCTTTCATGTCCAAGGATGCGGAAAAAATGCAACAGCTTCGCCAAAGCCGAGCCTTCTACAGTGGATGGGATGGAGATATTCAGCAGCAGCAACAGCAACGTCAACAACACCAGCAGCAACAGAAACATCATCATCGCCATGAGTACAGGTCATCAATCCCCCATACCTACTACGAGCAAAGCAACGAGACAACAAACGAGATTGTATTCGGGGCCGTGCAGGAGCAAAATGCGAATAAGGAATCCGTGGTAATCAAGCCTGTGGATTATGGCGAGTCATTGTATGATCATCACAACATCCGATCTAGAATCAACTACATGAGATATCCCCCCAGTGAGAAGACTGAAGATACTATGCACTTCACTTATGATGTGGACCATTGGAATGCTAATGTGACAGCCGACTCCGGCCAGGGTGAATGA 1596 0.4599 MGRNLFVLGLTVLVLFAGVTSAASTTSPAKIVSGFLSNAVPAFTKWLWSLKATTKTAVSGRQMMKFEGGYTVETVFDGSKLGIEPYAVELLPNGELLILDSANSNLYRISSSLSLYSRPRLIAGSAEGYSGHVDGKVREARMNHPKGITVDDRGNIYVADTLNMAIRKISDSGVTTIAGGKWSRGGGHVDGPSEEAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHFDDCAYQYGSGFPLGIAMLVGAGFFGYMLALVQRRLGTIVASQNDQSRTMAGISPSPYKKPLKSVRPPLIPSENEPEKQEEGFFGSLGKLLANAGASMVEIIGGLFPGFRKKPAIYYFQSQPLLHQPQKHTSAWPVQESFVIPDEDEPPSIDTRAPTPRKTYPFMSKDAEKMQQLRQSRAFYSGWDGDIQQQQQQRQQHQQQQKHHHRHEYRSSIPHTYYEQSNETTNEIVFGAVQEQNANKESVVIKPVDYGESLYDHHNIRSRINYMRYPPSEKTEDTMHFTYDVDHWNANVTADSGQGE 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0947 531 MobiDBLite consensus disorder prediction 371 391 - -
Lele53g0947 531 SUPERFAMILY NHL repeat 71 229 - -
Lele53g0947 531 Pfam NHL repeat 143 168 IPR001258 GO:0005515
Lele53g0947 531 Gene3D - 28 227 IPR011042 -
Lele53g0947 531 PANTHER - 29 499 - -
Lele53g0947 531 MobiDBLite consensus disorder prediction 417 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0947 Lele-ChrLele53 19081400 19084984 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0947 53 19081400 19084984 Lele49g1067 49 6891500 6903570 CCT
Lele53g0947 53 19081400 19084984 Lele50g1155 50 7756382 7775005 CCT
Lele53g0947 53 19081400 19084984 Lele51g1081 51 6986263 6998566 CCT
Lele53g0947 53 19081400 19084984 Lele55g0526 55 3388473 3391606 hybridization
Lele53g0947 53 19081400 19084984 Lele56g0514 56 3756412 3758970 hybridization