Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0942 ATGGGTTCCAAAGATGCATCTAAAGTGAAGTGGAGGAGGAGGAGGCTGCTGGAAGCCACCCGGAGTAGTAGTCGTCGCCGAACCGCCGTCGACAGGAAGATAAAGAAGTTGCGGCAGCTGATTCCCGGCGGCAGAAAGCTGAAGACGGACCGGTTGTTTCTCCGGACGGCGGAACACATCTTGCAGCTGAGGCTTCAGGTGAATATGTTGAAGGCTCTTTCCAAGATACTCACCCCAAAATAA 243 0.535 MGSKDASKVKWRRRRLLEATRSSSRRRTAVDRKIKKLRQLIPGGRKLKTDRLFLRTAEHILQLRLQVNMLKALSKILTPK 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0942 80 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 25 77 IPR036638 GO:0046983
Lele53g0942 80 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 10 77 IPR044660 GO:0006355
Lele53g0942 80 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 14 63 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0942 Lele-ChrLele53 19030785 19031027 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0942 21 80 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G43060 36.667 3.31e-08 45.8