Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0940 ATGTTTTCGTTGTGTACGCAAACGCCACTTTTCTCTGTCTCCTTCTTCCATCTTCCGTACTTTATTACAGAAAGCGACCTTCTCCCTCCATCACCACCTCAATCCTCTGCAAAATATTTCTTCTCGGCTTCCTCAGGTACATCATCTTTCATCATTGGTGCTACTTACCACTGCAAGGAATTAAAAAGGCGTGTTTTAATCAGTGGAATTTGTGGTAGTTGTGCATTGCAGACATTGACATACACTGGTGTTGGATATAGCTCCCCTGTTCTTGCTTCAGTAATTAATGGCGGATCTCTCCCCTGTTTTTACCTTCTTTCTTGCCATCGTTTTCAGGTATATATCAACCACCATTATCTCTTTAAAACTAGGGTTTCTTCCACTAAAGCCATATCCATTGACCATGAAGGGGCGTTAATGGTGACACTGTGCAGAGGCTCTGTGTTGGAAGACGACGATAAGGCAATGGCACAAGATGAGTGGCTTCTAGGAGCCATGATAGAAAACGTTGATAATGAAGGAGTATCCAGAAGTTGTAATGACAGCAACCATTTGATGCAGCTTCATGGTGACCTTATCCACCATTTTGATGGTTCATTGCTAGGCATCGAATTGTTTAAGCTGAAAGTAGAACAGAGGAAGGAGCGAGAAAAACAGAGCAGAAGATCGATGGAGGATATAAAATTAGCAATATCAATGGTGGCAGCTCAGGTGTTGGAAGTAGGACTCAGCACTCTGATAAAAGCAGCAACCAACAAAGGGATGAGCGACTATGTTTTCGCTGTGTGTGCAGGGCAGACATTGATATACACTGGTATCGGATATAGCTCCCCTGTTCTTGCTTCAGTCATGGCCGATCTCTCCCTTGTTTTCACCTTCCTTCTTGCCATCGTTTTCAGATATGAAAAACTGGAAGTGAGGCAAGTGAGCAGCTTGGCAAAATGTATGGGCACAGTGTTGTCCATTGCAGGGGCGTTAATGGTGACACTGTACAGGGGTGAGGCAGATTCCAAGTTGGAAGACGATGATAAGGCGACGATTATGGGTGGAGGAAGATTCGTGTCGCAAGATGAGTGGCTTCTTGGGGGCATTCTACTTGCACTTGGCAGCTTCTGTCTTTCGATCTTTTTTAACGTTAAGACATGGATAATGAAGGAGTATCCAGAAGTTGTAATTGTAGCAACCATTTCATGCAGCTTCGTGGTGATGGTATCCACCATTGTTACTCTTATTGCTGAGAGAAATAATGCTCAAGCATGGACTCTTCGTCCCGATTTGGAGTTGGCTGCTGTTTTATATTCTGGCATTGTTGTGGTACCAGTGAGAAGCATAACGAATACATGGGCATGTGGAAGGAAGGGACCAGTGTACGTGGCCATGTTTACTCCTTTAGGAACGGTCATTGCACTTGCCATGGGACTCTTATTCCTCGGCGAATCTCTTTCTCTTGCAAGTGTGATTGGTGGTGGAGTGATATCTGTCGGGTTTTATGGAGTGTTATGGGGGCAGTCTCAACAGGAAAAGATGGCTTCTGAGAGAGAAGCATTGCCTTCATCTTCTTCTAATGCAGTTCCTCTTCTGCAGAACCAGAGCCTGGAGAAGCTGAGAGTAGGAAGAGAACAATATATAAAAGAGGAAAGGAAAGCAGAGGAAGGAGCGAGAAAAACAGAGCAGAAGATCAATGGAAGATATGCAAGTAACAATCTTAATGGTAGCAGCTCAGCGCAGACATTGATATATACTGGTATCGGATATAGCTCCCCTGTTCTTGCTTCAGTAATGGTGGATCTCTCCCCTGTTTTCACCTTCCTTCTTTCCATTGTTTTCAGAGGTTCCAAGTTGGAAGACGATGATAATTCAACGGCGGCTATGGGAGGAGGAAGTTCCGTGTCACAAGATGAGTGGCTTCCTGGAGGCATTCTATTTGCACTTGGCAGCGTCTGTGTTTCACTGATTTTTAAAGTCAAGACATGGATAATGAAGGAGTATACTGAAGTTGTAATGACAGCAACTGTTTCATGCAGCTTCGTGGTGACGTTATCCATCATTGTTGCTCTTGTTGATGAGAGAAATAATGCTCAAGCACAGATTCTTCGTCCTGATATGGAGTTGGCTGCCATATTATATTATGTGCATTTTTGGTCAACTTTCAAACTTTAA 2160 0.4375 MFSLCTQTPLFSVSFFHLPYFITESDLLPPSPPQSSAKYFFSASSGTSSFIIGATYHCKELKRRVLISGICGSCALQTLTYTGVGYSSPVLASVINGGSLPCFYLLSCHRFQVYINHHYLFKTRVSSTKAISIDHEGALMVTLCRGSVLEDDDKAMAQDEWLLGAMIENVDNEGVSRSCNDSNHLMQLHGDLIHHFDGSLLGIELFKLKVEQRKEREKQSRRSMEDIKLAISMVAAQVLEVGLSTLIKAATNKGMSDYVFAVCAGQTLIYTGIGYSSPVLASVMADLSLVFTFLLAIVFRYEKLEVRQVSSLAKCMGTVLSIAGALMVTLYRGEADSKLEDDDKATIMGGGRFVSQDEWLLGGILLALGSFCLSIFFNVKTWIMKEYPEVVIVATISCSFVVMVSTIVTLIAERNNAQAWTLRPDLELAAVLYSGIVVVPVRSITNTWACGRKGPVYVAMFTPLGTVIALAMGLLFLGESLSLASVIGGGVISVGFYGVLWGQSQQEKMASEREALPSSSSNAVPLLQNQSLEKLRVGREQYIKEERKAEEGARKTEQKINGRYASNNLNGSSSAQTLIYTGIGYSSPVLASVMVDLSPVFTFLLSIVFRGSKLEDDDNSTAAMGGGSSVSQDEWLPGGILFALGSVCVSLIFKVKTWIMKEYTEVVMTATVSCSFVVTLSIIVALVDERNNAQAQILRPDMELAAILYYVHFWSTFKL 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0940 719 Pfam EamA-like transporter family 361 500 IPR000620 GO:0016020
Lele53g0940 719 SUPERFAMILY Multidrug resistance efflux transporter EmrE 259 331 - -
Lele53g0940 719 Coils Coil 539 559 - -
Lele53g0940 719 SUPERFAMILY Multidrug resistance efflux transporter EmrE 423 505 - -
Lele53g0940 719 PANTHER WAT1-RELATED PROTEIN 571 713 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0940 Lele-ChrLele53 19001963 19010252 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0940 580 708 Nodulin-like Gene Family AT3G28050 31.481 1.83e-12 67.8