Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0939 ATGGAGGATATAAAATTAGCAATATCAATGGTGGCAGCTCAGGTGTTGGAAGTAGGACTCAGCACTCTGATAAAAGCAGCAACCAGCAAAGGGATGAGCGACTATGTTTTCGTTGTGTACTCAAACGCCATGGCTCTCTCTCCCCTTCTCCCATCTTCCTTCCTTTATTACAGAAGGCGACCTTTTCCCTCCATCACCACCTCAATCATCGGCAGAATATTTCTTGTCAGCTTGCTCATGTGTGCAGGGCAGACGTTGATATACACTGGTATCGGATACAGCTCCCCTGTTCTTGCTTCAGTCATGGCCGATCTCTCCCCTGTTTTCACCTTCCTTCTTGCCATCGTTTTCAGATATGAAAAACTGGAAGTGAGGCAAGTGAGCAGCTTGGCAAAATGTATGGGCACAGTGTTGTCCATTGCAGGGGCGTTAATGGTGACACTGTACAGGGGTGAGGCAAAACGTAGTGGAGATTCCAAGTTGGAAGACGATGATAAGGCGACGATTATGGGTGGAGGAAGATTCGTGTCGCAAGATGACTGGCTTCTTGGGGGCATTCTACTTGCACTTGGCAGCTTCTGTCTTTCGATCGTTTTTAACGTGAAGACATGGATAATGAAGGAGTATCCAGAAGTAGTAATGATAGCAACCATTTCATGCAGCTTCGTGGTGATGGTATCCACCATTGTTACTCTTATTGCTGAGAGAAATAATGCTCAAGCATGGACTCTTCGTCCTGATATGGAGTTGGCTGCTGTTTTATATTCTGGCATTATTGTGGTACCAGTGAGAAGCATAACGAATATATGGGCTTGTGGGAGGAAGGGACCAGTGTACGTGGCCATGTTTACTCCTTTAGGAACGGTCATTGCACTTGCCATGGGACTCTTATTCCTGGGCGAATCTCTTTCTCTTGCAAGTGTGATTGGTGGTGGAGTGATATCTGTCGGGTTTTATGGAGTGTTATGGGGGCAGTCTCAACAGGAAAAGATGGCTTCTGAGAGAGAAGCATTGCCTTCATCTTCTTCTAATGCAGTTCCTCTTCTGCAGAACCAGAGCCTGGAGCAGCTGAGAGTAGGAAGAGAACAATATATAAAAGAGGAAAGGAAAGCAGAGGAAGGAGCGAGAAAAACAGAGCAGAAGATCAATGGAAGATATGCACTAACAATCTTAATGGTAGCAGCTCAGACATTGATATATACTGGTATCGGATATAGCTCCCCTGTTCTTGCTTCAGTAATGGTGGATCTCTCCCCTGTTTTCACCTTCCTTCTTTCCATTGTTTTCAGATATGAAAAAGTGGAAGTGAGGCAAGTGAGCGGCCATGCAAAATGCATCGGGACAGTGTTGTCCATTGCAGTAGCTTTAATGGTGACACCGTACAGAGGTTCCAAGTTGGAAGACGATGATAATTCAACGGCGGCTATGGGAGGAGGAAGTTCCGTGTCACAAGATGAGTGGCTTCCTGGAGGCATTCTATTTGCACTTGGCAGCGTCTGTGTTTCACTGATTTTTAAAGTCAAGACATGGATAATGAAGGAGTATACTGAAGTTGTAATGACCGCAACTATTTCATGCAGCTTCCGTGGTGACGTTTCCATCATTGTTGCTCTTGTTGATGAGAGAAATAATGCTCAAGCACAGATTCTTCGTCCTGATATGGAAATGGAGAGGTTAGATTGGAAAAGCTATAGTAGCCTAGCTAAATCACTTGGAACCATAGTATCAATTGCTGGTGCATTTGTTTCAACTCTATACAAAGGCCCTACACTTCTGAGTAGGCTATCTCTTGCAGACTCCTTCCCACAGAAACTTTTCTCACAAGAGTCTAATTACATGCTTGGAGGACTATGTCTTGCGGCAGATTGTTTGATAGTTCAGCATACGTTATTGTACAGAGACGCAAGTGCATGGAGCTTACAGTCCAAGTTGAGATTTTTTGCAGTTCTATACTCGGGGGTGTTTGGTTCTGCATTTCAAGTTGGTGTTGGTACAGGTGTCTCCACCAGACAGGACCTGTTTTTTTTGGTTGGTGCTATTGTGATAGTTATTGGGTTCTACTGTGTGTTGTGGGGGAAAGCCAGAGATATTGAGGATGCTGGCATGGGAAGCTCAGAATCAAGTGCTGAAAACACTCCTCTTTTAAAGACTATTCATGGAGAACCTGGTCCTGGCTGTCCTGCCCGCCCCTAG 2193 0.4505 MEDIKLAISMVAAQVLEVGLSTLIKAATSKGMSDYVFVVYSNAMALSPLLPSSFLYYRRRPFPSITTSIIGRIFLVSLLMCAGQTLIYTGIGYSSPVLASVMADLSPVFTFLLAIVFRYEKLEVRQVSSLAKCMGTVLSIAGALMVTLYRGEAKRSGDSKLEDDDKATIMGGGRFVSQDDWLLGGILLALGSFCLSIVFNVKTWIMKEYPEVVMIATISCSFVVMVSTIVTLIAERNNAQAWTLRPDMELAAVLYSGIIVVPVRSITNIWACGRKGPVYVAMFTPLGTVIALAMGLLFLGESLSLASVIGGGVISVGFYGVLWGQSQQEKMASEREALPSSSSNAVPLLQNQSLEQLRVGREQYIKEERKAEEGARKTEQKINGRYALTILMVAAQTLIYTGIGYSSPVLASVMVDLSPVFTFLLSIVFRYEKVEVRQVSGHAKCIGTVLSIAVALMVTPYRGSKLEDDDNSTAAMGGGSSVSQDEWLPGGILFALGSVCVSLIFKVKTWIMKEYTEVVMTATISCSFRGDVSIIVALVDERNNAQAQILRPDMEMERLDWKSYSSLAKSLGTIVSIAGAFVSTLYKGPTLLSRLSLADSFPQKLFSQESNYMLGGLCLAADCLIVQHTLLYRDASAWSLQSKLRFFAVLYSGVFGSAFQVGVGTGVSTRQDLFFLVGAIVIVIGFYCVLWGKARDIEDAGMGSSESSAENTPLLKTIHGEPGPGCPARP 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0939 730 SUPERFAMILY Multidrug resistance efflux transporter EmrE 244 327 - -
Lele53g0939 730 Pfam EamA-like transporter family 183 322 IPR000620 GO:0016020
Lele53g0939 730 Pfam EamA-like transporter family 389 449 IPR000620 GO:0016020
Lele53g0939 730 Pfam EamA-like transporter family 10 147 IPR000620 GO:0016020
Lele53g0939 730 PANTHER WAT1-RELATED PROTEIN 556 627 IPR030184 GO:0016020|GO:0022857
Lele53g0939 730 SUPERFAMILY Multidrug resistance efflux transporter EmrE 55 149 - -
Lele53g0939 730 Coils Coil 361 381 - -
Lele53g0939 730 SUPERFAMILY Multidrug resistance efflux transporter EmrE 386 451 - -
Lele53g0939 730 MobiDBLite consensus disorder prediction 702 730 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0939 Lele-ChrLele53 18985717 18993053 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0939 554 710 Nodulin-like Gene Family AT3G28050 27.803 8.06e-15 75.1