Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0936 ATGCCATTTGGGTTGGTCTCAGCCTGGAGCAAGCGTCGCCGGAGCAAGTCTCAAGATCATACAGACCCCTGGATTTACAAACCTCTGGAGTCTTGGCAACTTGAAGATCAAGCAACGAGGCCCACAAAAAGGCACCATGGTTCATCTGTATACACACTCAAGGAGATGGAAGAGGCAACAGGATCATTCAGTGATGATGATCTGCTTGGAAAGGGAGGATTTGGCAGAGTCTACAGAGGCACTTTGCGTTCTGGAGAGCGGTTCCTAGTATATGAATATATGCATAATGGGAACCTGCAAGATCATTTGAATGGAATTGGGCAAAGAAAAATGGATTGGCCTCAAAGACTCAAAGTAGCACTGGGAGCAGCAAGAGGACTGGCATATCTCCATTCAAGTTCTGCTGTTGGAATTCCTATTGTTCACAGAGACTTCAAATCCACCAATGTTCTCTTAAATGCCAATTTTGAAGCTAAGATATCTGATTTTGGGCTAGCTAAGTTAATGCCAAAAGGACAGGAGACACATGTGACCGCCAGAGTGCTCGGTACATTTGGTTACTTCGATCCTGAGTATACATCGACAGGGAAACTCACTCTACAAAGTGATGTTTATGCTTTTGGTGTTGTTCTTCTTGAGCTTTTGACAGGACGTCGAGCTGTATATTTAAACCAAGGTCCAAATGATCAAAACCTTGTATTACAGGTGAGGAACATACTGAATGACCGCAAGAGGCTGCGCAAGGTGATAGATCCAGAAATGGTTCGAAATTCTTATACCATCGAGTCCATAGCTATGTTTGGCAATCTTGCATCACGATGTATCCGTGTTGACAGTAGTGAGAGACCTTCTATGGCAGAATGTGTAGAAGAGCTGCAAATGATTATCTATACTAATTCAAAAGGCTTGGCAATGGTTATGCATAGTTTGAGAATGATCTAG 942 0.4331 MPFGLVSAWSKRRRSKSQDHTDPWIYKPLESWQLEDQATRPTKRHHGSSVYTLKEMEEATGSFSDDDLLGKGGFGRVYRGTLRSGERFLVYEYMHNGNLQDHLNGIGQRKMDWPQRLKVALGAARGLAYLHSSSAVGIPIVHRDFKSTNVLLNANFEAKISDFGLAKLMPKGQETHVTARVLGTFGYFDPEYTSTGKLTLQSDVYAFGVVLLELLTGRRAVYLNQGPNDQNLVLQVRNILNDRKRLRKVIDPEMVRNSYTIESIAMFGNLASRCIRVDSSERPSMAECVEELQMIIYTNSKGLAMVMHSLRMI 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0936 313 Pfam Protein kinase domain 86 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele53g0936 313 Gene3D Phosphorylase Kinase; domain 1 38 98 - -
Lele53g0936 313 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Lele53g0936 313 FunFam receptor-like serine/threonine-protein kinase NCRK 94 304 - -
Lele53g0936 313 PANTHER OS01G0750732 PROTEIN 23 297 - -
Lele53g0936 313 SUPERFAMILY Protein kinase-like (PK-like) 49 301 IPR011009 -
Lele53g0936 313 Gene3D Transferase(Phosphotransferase) domain 1 99 307 - -
Lele53g0936 313 ProSiteProfiles Protein kinase domain profile. 1 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0936 Lele-ChrLele53 18973898 18976290 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0936 54 295 Receptor kinase-like Gene Family AT4G02010 39.175 4.66e-64 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIb Lele53g0936 Pkinase 6.8e-32 CL0016