Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0926 ATGACGGAGGCTATGATTGAAGTCGCCCTGGAGACTTTGAGCTCACTCATCCAGAAAGAGCTCGGTTTGTTTTTGGGTGTTGATCGAGAGATGAGAAGGCTTTCCAGCGTCCTCTCTACGATCAAGGCCGTGCTTGAAGATGCCGAGGAGAAGCAGCTCACCGACAAAGCTCTCAAAAATTGGCTCCACAAGCTTGAGGATGCTGCTCACTTGCTGGATGACGTCTTGGACGAGTGTTCAACACACGCCCTTTCATGGGAATACCAAGCACTCAAGTGTGGGTCTTCACACACGGTACTAGGCTCTTGCTTTTACTATTTACATCCCAGTAAAGTTTTGTTCCGTTACAAAATTGCCAAGAAATTGAAAGACATAAGTGAAAGAATAGATAAAATTGCTGAGGAAAGGTCGAAATTTCATTTGTGTCCGACGGTTCCTGAGAGGAGAAATGAAGTCATTGAATGGCGACAAACTACCTCAATCATTACTCAACCCCAATTCTATGGAAGAGATGCAGAGAAGGAAAAAATCGTGAATTTTTTTATTGGTGATGCTTCTAACTTTGAGGATGTATCGGTGTATCCCATTACCGGAATTGGCGGTCTTGGAAAAACTACCCTTGCCCAACAAGTCTTCAATGATGAGAGGGTAGCTGATCATTTTGATCCAAGAATTTGGGTATGTGTTTCTGAAGATTTCGGTTTGAAGAGACTGTCAAAAGCTATAATAGAGTCAGCTGGGCATGTATGTGGTGATTTGGATCTCGAGCCATTACAAAGACGACTTCGAGAGGTGCTTGGAAGAAAAAGATATTTGCTTGTTCTGGATGATGTGTGGAATGATAACCAGGAGAAATGGGATAAGTTGAAATATGTTTTGGCTTGTGGGTCAAAGGGTGCTTCGATTCTGGTCACTACTCGTCTTCCAAAGGTTGCAGACATTACAGGAACAATGCCTCCTCATCAGTTATCACTGTTGTCAGAAGATGATTGTTGGGAGTTGTTTAGGCAACGAGCTTTTGGATCGGAGAAGGAGGAACGAGTAGAGCTTGTGGCTATAGGGAAGGAGATAGTAAGGAAATGTAAAGGAGTTCCCCTTGCTGCTAAATCTCTGGGAAGTCTTTTGCACTTCAAAAGTGAGGAAAAAGATTGGCTCTATATTAAAGAAAGTGAAATTTGGAGTTTGCCACAGGATGAATATTCCATCTTGCCTGCTTTAAGATTGAGTTATTTGAATTTACCAACAAAACTAAGACGGTGTTTTTCCTTCTGTGCTTTGTTCCCTAAAGATGAAAGTATGAGTAAGAACCTGGTTCTTGAACTTTGGATGGCTAATGGCTTCATTTCATCAAATGAAAGGATGGAAGTGGAAGATGATGGGGATAGAGTGTGGAATGAATTATATTTAAGATCATTTTTTGATGATGTTGTGATAGATGGTTTACTCAATGACACACGGTTCAAGATGCATGATCTTGTTCATGATCTAGCCCAATCTGCTGTAGAGGATGCCTATCGTTGCATTACATCTGAGAACGATCCTACTATTCTATCTAAAAGAACTTGTCATCTCTCATTTTATGGTTATAAGCCATCTGATTGGTTGTCTCATTTAGACCAAATCAAATCCTTGAAGACCTGTATAATGCCAGGGACTGTTTATGAGGACAAGAATTATTGGGATATATTGATGAAATGTTACTCATTGCGGGCGCTTCGGGTCTCATCGTATTTTAGAGATGTGCCATCTACCATTAGCCAATTAAAACATTTGAGGTACTTAAACCTTTCCTATGGTTACTTTAAAACACTTCCTAATTCGATTTGTAGATTGCACAATTTACAGGTTTTGAATTTGAGCGACTGTCAATCTCTAGAAAAGTTGCCGAACCAAATGAAGCGCTTGAAGTCCCTCCGTCATCTACATTTGGAATGGTGTAGATCATTAGCTAGATTGGCACCCCAGATGGGTCAACTAACTTGCTTAAAGACCTTAAACAAATACATTGTTGGTACACAAAAAGGGTTCCTATTAGCAGAATTAAGAAATTTGAAGCTTAAAGGAACACTCCACATTAGGCACTTGGAGAGAGTGAGAAGCGTGATGGACGCCAAAGAAGCCAATTTGACGGATAAGCACTTAACGGAGTTGGTGTTGTCATGGGAAAGAAATGAAGAATCCCAATTAGAGGAAAATGATGAGCAGATTCTTGAAGATCTTCAACCTCATTCACAACTTAAAACTTTGTTAATTGGAGGATATTTTGGTGCTCAATTGCCGCAGTGGATGTTTAATTCTACCCTAAAATATTTAAGCCAGTTAGAACTCGTGGATTGTAAAAATTGTTCCCACATTTCACCTCTAGAGAAACTTCCATCTTTGACGAGTCTTAGTATTTCGAACATGAATCTCTTGCAATATGTAGACAACGAATCTTACGATAATGGGGTAGCAAGAGGTTTCAACACTCTGGAATTCCTCTCGTTGGAAAAGCTACCAAACCTTGTGAAGTTGTCTAGGGCAGATGGAGAGAACATGTTCCCATGTCTCTCGCAATTGCAAATTACTCGTTGTCCAAAATTGACCTTGCCTTGCCTTCCGTCTGTTACCGAACTAACATTGGGAGAAGAATCCAACCGAGTATTACTGGGTTCAATTCGAAATGTGCGCAATCTTGAATGCCTCTGGTTCATTAACGATAAAGATCTGATTTCCTTTCCAAATGGGATGCTAGGAGGCCTTGTTTGTCTCAAGGAAATCCACATTTACTCTCTTGAAAAACTTAAAGTACTCCCAACTGAGCTCGGCAACTTAAATGCTCTTGAAGAATTACATGTTGCACATTGCAAAAATCTCGAGACATTGACAGAGCAAGCATTTCATGGTTTGTATTCTCTCAAAAGATTGAAAATTTCTGGGTATCCTAAGTTCAAATTATCAGAAGGCTTTCAATACCTCGCTGCCCTCGAAGATCTTGCGATTGAAGGCTGCCCAGAAGTGGAAGATTTTACTGATGCTTTACAGCATACTACGGCTCTTCGATCGTTAGGTTTATATGATCTTCCCAATCTAGCATCATTGCCTGACTGTCTGGGAAACCTTAGGTTGCTGAAGTCATTGGAGATAAGTGGTTGCCCCAGGCTGATGTCACTTCCAATGAGCATTCAGTGCCTTAGTAGTTTGAAAGAGTTGGAAATTTATAGTTGTCCGGAGTTAGTGAAGAGATGTAAGGAGGGAACAGGGGAGGATTGGCCCAAGATTGCTCTTGTTTCGCGCATTCATTTGAACGAACATTCACATTTATCATCTCAAGGAAATTCGTATAGATATCGTCGTTTGGAATATAGAGATGAAAAATCTCTGCTTCCAAATTTTCAGGGAGATTTGGCATGGGGGATTGGATCTAGCGGACAAAGCAGTGACTTGAAGCATGCAGTTTCAGAGCAGTCAAAATCTTATTGGTGGGATTATTAA 3474 0.4067 MTEAMIEVALETLSSLIQKELGLFLGVDREMRRLSSVLSTIKAVLEDAEEKQLTDKALKNWLHKLEDAAHLLDDVLDECSTHALSWEYQALKCGSSHTVLGSCFYYLHPSKVLFRYKIAKKLKDISERIDKIAEERSKFHLCPTVPERRNEVIEWRQTTSIITQPQFYGRDAEKEKIVNFFIGDASNFEDVSVYPITGIGGLGKTTLAQQVFNDERVADHFDPRIWVCVSEDFGLKRLSKAIIESAGHVCGDLDLEPLQRRLREVLGRKRYLLVLDDVWNDNQEKWDKLKYVLACGSKGASILVTTRLPKVADITGTMPPHQLSLLSEDDCWELFRQRAFGSEKEERVELVAIGKEIVRKCKGVPLAAKSLGSLLHFKSEEKDWLYIKESEIWSLPQDEYSILPALRLSYLNLPTKLRRCFSFCALFPKDESMSKNLVLELWMANGFISSNERMEVEDDGDRVWNELYLRSFFDDVVIDGLLNDTRFKMHDLVHDLAQSAVEDAYRCITSENDPTILSKRTCHLSFYGYKPSDWLSHLDQIKSLKTCIMPGTVYEDKNYWDILMKCYSLRALRVSSYFRDVPSTISQLKHLRYLNLSYGYFKTLPNSICRLHNLQVLNLSDCQSLEKLPNQMKRLKSLRHLHLEWCRSLARLAPQMGQLTCLKTLNKYIVGTQKGFLLAELRNLKLKGTLHIRHLERVRSVMDAKEANLTDKHLTELVLSWERNEESQLEENDEQILEDLQPHSQLKTLLIGGYFGAQLPQWMFNSTLKYLSQLELVDCKNCSHISPLEKLPSLTSLSISNMNLLQYVDNESYDNGVARGFNTLEFLSLEKLPNLVKLSRADGENMFPCLSQLQITRCPKLTLPCLPSVTELTLGEESNRVLLGSIRNVRNLECLWFINDKDLISFPNGMLGGLVCLKEIHIYSLEKLKVLPTELGNLNALEELHVAHCKNLETLTEQAFHGLYSLKRLKISGYPKFKLSEGFQYLAALEDLAIEGCPEVEDFTDALQHTTALRSLGLYDLPNLASLPDCLGNLRLLKSLEISGCPRLMSLPMSIQCLSSLKELEIYSCPELVKRCKEGTGEDWPKIALVSRIHLNEHSHLSSQGNSYRYRRLEYRDEKSLLPNFQGDLAWGIGSSGQSSDLKHAVSEQSKSYWWDY 1157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0926 1157 PANTHER DISEASE RESISTANCE PROTEIN RP 38 858 IPR044974 GO:0006952
Lele53g0926 1157 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 424 IPR027417 -
Lele53g0926 1157 FunFam Probable disease resistance protein At1g63360 410 499 - -
Lele53g0926 1157 SUPERFAMILY L domain-like 826 1076 - -
Lele53g0926 1157 Coils Coil 938 958 - -
Lele53g0926 1157 Coils Coil 31 51 - -
Lele53g0926 1157 Gene3D - 409 500 IPR036388 -
Lele53g0926 1157 Pfam NB-ARC domain 191 389 IPR002182 GO:0043531
Lele53g0926 1157 Pfam Rx N-terminal domain 6 87 IPR041118 -
Lele53g0926 1157 Gene3D - 325 408 IPR042197 -
Lele53g0926 1157 Gene3D - 5 128 - -
Lele53g0926 1157 Gene3D Ribonuclease Inhibitor 959 1080 IPR032675 -
Lele53g0926 1157 Gene3D Ribonuclease Inhibitor 522 675 IPR032675 -
Lele53g0926 1157 Gene3D Ribonuclease Inhibitor 676 865 IPR032675 -
Lele53g0926 1157 Gene3D Ribonuclease Inhibitor 866 958 IPR032675 -
Lele53g0926 1157 SUPERFAMILY L domain-like 488 863 - -
Lele53g0926 1157 FunFam Probable disease resistance protein At1g61300 149 318 - -
Lele53g0926 1157 CDD RX-CC_like 3 134 IPR038005 -
Lele53g0926 1157 PRINTS Disease resistance protein signature 265 279 - -
Lele53g0926 1157 PRINTS Disease resistance protein signature 193 208 - -
Lele53g0926 1157 PRINTS Disease resistance protein signature 361 375 - -
Lele53g0926 1157 PRINTS Disease resistance protein signature 609 625 - -
Lele53g0926 1157 Gene3D - 149 317 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0926 Lele-ChrLele53 18879922 18883753 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0926 575 643 WRKY Transcription Factor Family AT4G12020 41.429 3.28e-07 53.1