Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0902 ATGATGCCTCGCACGTGCTCACAGTACGGTACCACCGGCCACAACTCCCGATCATGCACCGACCGCAACAACGGCTCCGGCGAGAACAGTATCTTACTCTTCGGGGTGCGAGTCACCCAAGGGAACTCGTTCAGGAAGAGCGCTAGCATGACCGATCTATCACATTACCAGCAGCCGCTGCCTCAGGATTCCAACGCCGACGCCGGTTACGCCTCCGATGATGTCGTTCACGCTTCCGGTCGTAGTCGCGAGAGAAAGAGAGGTGTTCCATGGACGGAGGAGGAGCATAGGCTATTCCTGCTCGGGCTTCAACAGGTAGGGAAAGGTGATTGGAGAGGGATTTCTAGAAACTTCGTGAAAACGCGCACACCAACTCAGGTAGCCAGCCATGCTCAGAAGTACTTCCTCCGCCGGCATAACCATAACCGGAGACGTCGGAGATCTAGTCTGTTTGATATCACCACCAACACGTTGACAGAATCCTCATCTTCAACAACAGTGGAAGAAGGGGGAGTCCATCAAGGAGTACCGCCGAAATATCCCCATTACGGCAGTGGTTTTGGCGGCTCATCATTTCATACTTCACTGTCCCCGCCGATGGTAGGAGCTGCTAAGCTGATAAGGCCTACGCCGATCCTGCCGGAGAAGTCGTCGATGGCATTCCAAGTGATGTCAGGAAAGCAGAGCGGTGGTGGTAATAGCAATAGCATGATCAGTGTTGCTTGA 726 0.5399 MMPRTCSQYGTTGHNSRSCTDRNNGSGENSILLFGVRVTQGNSFRKSASMTDLSHYQQPLPQDSNADAGYASDDVVHASGRSRERKRGVPWTEEEHRLFLLGLQQVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRHNHNRRRRRSSLFDITTNTLTESSSSTTVEEGGVHQGVPPKYPHYGSGFGGSSFHTSLSPPMVGAAKLIRPTPILPEKSSMAFQVMSGKQSGGGNSNSMISVA 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0902 241 SUPERFAMILY Homeodomain-like 85 138 IPR009057 -
Lele53g0902 241 FunFam transcription factor MYB1R1 89 140 - -
Lele53g0902 241 MobiDBLite consensus disorder prediction 49 70 - -
Lele53g0902 241 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 86 137 IPR006447 GO:0003677
Lele53g0902 241 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 83 139 IPR017930 -
Lele53g0902 241 CDD SANT 90 135 IPR001005 -
Lele53g0902 241 Pfam Myb-like DNA-binding domain 90 135 IPR001005 -
Lele53g0902 241 MobiDBLite consensus disorder prediction 1 24 - -
Lele53g0902 241 MobiDBLite consensus disorder prediction 49 65 - -
Lele53g0902 241 ProSiteProfiles SANT domain profile. 86 139 IPR017884 -
Lele53g0902 241 SMART sant 87 137 IPR001005 -
Lele53g0902 241 PANTHER TRANSCRIPTION FACTOR KUA1 3 174 - -
Lele53g0902 241 ProSiteProfiles Myb-like domain profile. 83 135 IPR001005 -
Lele53g0902 241 Gene3D - 89 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0902 Lele-ChrLele53 18683627 18684628 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele53g0902 Myb_DNA-binding 1.2e-10 CL0123