Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0895 ATGGATCGAAGCGTGCAAATACCTTCGTCTCGCACCGGAGTGGAGCCACAGGCCCCGGACAAGCGCACCATTTTCTGCAATGATCGCAAGGCCAACCTTGCCTGTGCATTCACGGGGAACTCGATATCAACTACAAAATATAACATCTTCACTTTCTTGCCAAAAGGGCTATTTGAACAGTTCAGGCGGGTTGCTAATCTCTATTTTCTTGGGATCTCAATTTTAGCAGCAACACCAATCAGTCCTATATCTCCAATAACTAATGTGGTTCCTCTATCTCTGGTGCTTCTTATCTCTCTTATTAAGGAAGCTTTTGAGGACTGGAAACGTCTTCAAAATGACAAGGTCATAAACAATAGAATGATAGATATTTTGCAAGATCAAACATGGGAGTCCATAGCCTGGAAAGATCTGCAGGTTGGAGACATTATCAGGGTTAAGCAGGATGGATTTTTTCCAGCAGATCTGCTTCTCCTGGCCAGTTCAAATGCAGATGGTGTCTGCTACATTGAGACTACAGCCTTTTACTATGTGTTTGGGCTACAGACTGCTAATTTGGATGGGGAAACCAATCTCAAGATCAGGAAAGCATTGGAGAAGACTTGGGATTACATGACTCCAGAGAAGGCATCTGAGTTTCTAGGTGAAATTCAGTATGAACAACCAAACAATTCATTGTATACCTTCACTGGAAATCTTATTATTCAAACACAAACACTACCTCTCAGTCAAAACCAAATTTTGCTGCGTGGCTGCAGTCTTAAAAATACAGGGTATATTGTTGGAGCAGTTATTTTCACGGGGCATGAAACAAAGGTGATGATGAATTCCATGAATGTGCCTTCTAAAAGAAGTAAATTGGAGAGGAAGCTTGGCAAACTCATACTCGCTCTATTTTCAACTCTCTTCGGAATTTGTGTTATCGGAGCCATAGGCAGTGGCATCTTTGTAAACAACAAATATTTCTATTTACGCCTTGATGTAGGAGGTGAGGGCTCAGCTCAGTTCAACCCAAATAACAGATTTATGGTTATTGTCCTGACTTTATTTACCCTCATCACTCTGTATTCACCTCTCATCCCTATTTCACTGTATGTGTCAATAGAGATGATCAAATTTATTCAGTCTACTCAATTTATCAACAAGGACCTGTGCATGTACCACAAGGAAACCAATACCCCAGCATTGGCCAGGACATCTAATCTAAATGAAGAACTTGGGCAGGTGGAATACATATTCTTTGACAAAACAGGAACTTTAACAAGAAACTTAATGGAGTTTTTTAAGTGTTCAATTGGAGAACAGGTCTATGGAACTGGTGTTACTGAAATTGAGAGGCAAATAGCAGAGCGTAATGGGATGAAAGTTGAGGAAAATCAATCAAGCGCTGCAGTGCAAGAGAGGGGCTTTAATTTTGATGATGATAGGCTTATGCAAGGAGCTTGGAGGAATGAGCCTAATCCTAACATTTGTATGGAATTCTTCAGATGCCTTGCTATATGCCATACTGTACTTCCTGAGGGCGATGAGTCCCCAGATAAAATCACGTATCAAGCACCCTCACCTGATGAGGCTGCTTTGGTCATTGCTGCAAAGTGCTTTGGTTTCTTCTTTTACAGACGCACACCAACGTCGATATTTGTTCGCGAATCACATGTTGAACAGAAGGGTAAACTCCAAGATGTGCCTTATGAAATTTTGAATGTGCTTGAGTTTAACAGTACAAGGAAGCGCCAGTCTCTTATATGCCGTTATCCAGATGGGAAGCTTGTATTATACTGTAAGGGTGCTGATACAGTAATCTACGAGAGACTCGCCGATGGCAATGAAGATATAAAGAAATTGACCAGGGAGTATTTGGAACAATTTGGAGCTGCTGGGTTAAGAACATTATGCCTGGCCTACAAAGAATTACATGCTCATGCATATGAAAGTTGGAATGAGAAGTTCATCCAGGCCAAGTCTTCTCTAAGTGATCGTGACAAGAAGTTGGATGAGGTGGCAGAACTTATAGAAACTGATCTGATTTTGATTGGTAGCACTGCCATAGAGGACAAGCTTCAAAAGGGAGTTCCATCATGTATAGGGACTCTCCAAAGAGCTGGCATTAAAATTTGGGTGCTTACTGGAGACAAGATTGAAACAGCAATAAATATAGCCTATGCATGCAATTTGATATCCAATGAGATGAAAAAGTTTATTATCAGCTCAGAAACTGATGCAATTAGAGAAGTTGAAGAAAGGGGTGACCCAGTGGAAATCATGCATTTTATTAGAGAAGAAGTGAAGAAAGGGTTGAAGAAGTCCCTTGAGGAAGCACAGAGCTATCTTCAATCTCTTAACGGACAAAAATTAGCACTTGTAATTGATGGGAAAAGTCTAACGCATGCATTAGACCCAAGTTTAAGAGTGATGCTTCTGAATTTGGGTTTGAATTGTCATGCGGTCGTTTGCTGTCGAGTTTCTCCTTTACAAAAAGCACAGGTCACAAGGCTAGTAAAAAAATGTGCACATAAAATAACATTAAGTATTGGTGATGGAGCCAATGATGTTGGCATGATTCAAGCTGCTCATGTTGGTGTTGGCATAAGTGGGATGGAGGGAATGCAAGCAGTGATTGCCAGTGATTTCTCCATTGCGCAGTTTCGTTTCCTTTCTGATTTACTTCTTGTCCATGGCCGGTGGTCATACCTTAGAATATGCAAGGTTATTACATACTTCTTCTATAAGAATCTCACATTCACTCTCACCCAGTTCTGGTTTACCTTTCAAACGGGGTTTTCTGGTCAGAGGTTCTATGATGATTGGTTTCAGTCATTATATAATGTTATCTTCACGGCACTGCCTGTGGTTGTCGTTGGACTATTCGACAAGGATGTGAGTGCATCTCTTTCGAGGAAGTATCCTGGACTCTACATGGAGGGAATAAAGAATGTGTTCTTCAAATGGAGGGTTGTGGCAACGTGGGCATTTTTTTCGGTGTATCAATCTTTGATATTGTTCTATTTTGTGATTTTGTCAAGTTCAGGTGCAAAAAATTCAGCAGGCAAAACATTTGGACAGTGGGATGTCAGTACAATGGCCTATACATGTGTTATTGTAACTGTCAATTTACGACTACTTATGATCTGTAATTCGGTCACAAGATGGCACTTAATTGGTGTTGGTGGAAGTATATTTGCATGGTTTGTATTCGTCTTCGTATATTCAGTGGTCAGACTGGTAAATTCTCCCTCTTTGAGAATAGATGGTTCTTTCCCTATGATTATCAGATTATTCAGGAAATCCAGAGACGAACCGGATAGCGGCAATAGGACACAGCTGCTGGAGGTGGGGAGTCATTTGACGCCATCAGAGGCGAGGAGCTATGCCACGTCTCAACTGCCTCGTGAGGTATCAAGGCACACAGGTTTTGCTTTTGATTCACCTGGCTACGAGTCCTTTTTCGCTTCACAGTTCGGTGTGTGTGTGCCGCAAAAGGCATGGGATGTTGCTAGACGAGCTAGCAGGTTTCGAGCACCAAAGATAGGAGGCCACAAAAAATAG 3546 0.4148 MDRSVQIPSSRTGVEPQAPDKRTIFCNDRKANLACAFTGNSISTTKYNIFTFLPKGLFEQFRRVANLYFLGISILAATPISPISPITNVVPLSLVLLISLIKEAFEDWKRLQNDKVINNRMIDILQDQTWESIAWKDLQVGDIIRVKQDGFFPADLLLLASSNADGVCYIETTAFYYVFGLQTANLDGETNLKIRKALEKTWDYMTPEKASEFLGEIQYEQPNNSLYTFTGNLIIQTQTLPLSQNQILLRGCSLKNTGYIVGAVIFTGHETKVMMNSMNVPSKRSKLERKLGKLILALFSTLFGICVIGAIGSGIFVNNKYFYLRLDVGGEGSAQFNPNNRFMVIVLTLFTLITLYSPLIPISLYVSIEMIKFIQSTQFINKDLCMYHKETNTPALARTSNLNEELGQVEYIFFDKTGTLTRNLMEFFKCSIGEQVYGTGVTEIERQIAERNGMKVEENQSSAAVQERGFNFDDDRLMQGAWRNEPNPNICMEFFRCLAICHTVLPEGDESPDKITYQAPSPDEAALVIAAKCFGFFFYRRTPTSIFVRESHVEQKGKLQDVPYEILNVLEFNSTRKRQSLICRYPDGKLVLYCKGADTVIYERLADGNEDIKKLTREYLEQFGAAGLRTLCLAYKELHAHAYESWNEKFIQAKSSLSDRDKKLDEVAELIETDLILIGSTAIEDKLQKGVPSCIGTLQRAGIKIWVLTGDKIETAINIAYACNLISNEMKKFIISSETDAIREVEERGDPVEIMHFIREEVKKGLKKSLEEAQSYLQSLNGQKLALVIDGKSLTHALDPSLRVMLLNLGLNCHAVVCCRVSPLQKAQVTRLVKKCAHKITLSIGDGANDVGMIQAAHVGVGISGMEGMQAVIASDFSIAQFRFLSDLLLVHGRWSYLRICKVITYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTALPVVVVGLFDKDVSASLSRKYPGLYMEGIKNVFFKWRVVATWAFFSVYQSLILFYFVILSSSGAKNSAGKTFGQWDVSTMAYTCVIVTVNLRLLMICNSVTRWHLIGVGGSIFAWFVFVFVYSVVRLVNSPSLRIDGSFPMIIRLFRKSRDEPDSGNRTQLLEVGSHLTPSEARSYATSQLPREVSRHTGFAFDSPGYESFFASQFGVCVPQKAWDVARRASRFRAPKIGGHKK 1181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0895 1181 Pfam Phospholipid-translocating ATPase N-terminal 24 88 IPR032631 -
Lele53g0895 1181 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 20 1078 - -
Lele53g0895 1181 Pfam Phospholipid-translocating P-type ATPase C-terminal 873 1075 IPR032630 -
Lele53g0895 1181 SUPERFAMILY HAD-like 401 887 IPR036412 -
Lele53g0895 1181 SFLD p-type atpase 395 895 IPR044492 -
Lele53g0895 1181 SUPERFAMILY Calcium ATPase, transmembrane domain M 37 1072 IPR023298 -
Lele53g0895 1181 CDD P-type_ATPase_APLT_Dnf-like 39 1004 - -
Lele53g0895 1181 SUPERFAMILY Calcium ATPase, transduction domain A 119 274 IPR008250 -
Lele53g0895 1181 Coils Coil 763 783 - -
Lele53g0895 1181 FunFam Phospholipid-transporting ATPase 677 884 - -
Lele53g0895 1181 ProSitePatterns E1-E2 ATPases phosphorylation site. 415 421 IPR018303 -
Lele53g0895 1181 Gene3D - 102 277 - -
Lele53g0895 1181 Gene3D - 541 656 IPR023299 GO:0000166
Lele53g0895 1181 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 463 682 IPR023299 GO:0000166
Lele53g0895 1181 FunFam Phospholipid-transporting ATPase 521 676 - -
Lele53g0895 1181 SFLD Haloacid Dehalogenase 395 895 - -
Lele53g0895 1181 Pfam Cation transport ATPase (P-type) 515 604 - -
Lele53g0895 1181 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 817 923 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele53g0895 1181 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 37 1072 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Lele53g0895 1181 Gene3D - 674 884 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0895 Lele-ChrLele53 18627353 18637281 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0895 14 1176 Primary Pumps ATPases AT1G59820 70.667 0.0 1759